Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0437 ATGTCTAGCCCTGGTAGTCCAAAGATAGAAGAGAAGATAATTACAAAGGAAGATAAAGTCAAATCTGCTAAAACTGAGATGGGTGAGGTGAAGGAAGAAAATGAGAGATTGAAGAAGACGCTGGAAAGAGTAGAAAAGGATTACCACTCCCTTCAACTCCGTTTCTTTGACATCCTTCACAAAGATGTTTCAAAGAAGGGTGTGGTTGATTCATCTACTTCCCATGAAGATCAAAGTGAAGAGCCCGAGTTTGTCTCACTTTGCCTTGGAAGGACTCCAACGGAGCCTAAGAAGGAGGCAATAATTGGAAACTCCAACAAACCAACAGAAAAAGAGGTTGGACCCAACCTTACTCTTGGATTAGACTCCAAACACCTGTTGGAGATGGAAGTTGTGTCTGATTTAAGTCCAATGAACAGCTCAGAAGAACCAAAGGAAACGCAAACAGAGGGAACATTGTCAACAAATCAATCAGCAAAAGTGATAAATGTAAATACTGACATTTCAGATCAAATGCCAGCCAAGAGAGCAAGGGTATCTGTGAGAGCTAGATGTGATACTCCCACGATGAATGATGGGTGTCAATGGAGGAAATATGGACAGAAGATAGCAAAGGGAAATCCATGTCCGAGGGCATACTATCGTTGCACAGTTGCACCAACATGCCCAGTTAGGAAGCAGGTGCAAAGGTGTTCCGAGGACCTGTCCATCTTAATCACAACCTATGAAGGGACCCACAACCACAAACTTCCAGTCTCAGCCACAGCCATGGCTTCAACTACTTCTGCTGCTGCTTCCATGCTATTGTCAGGTTCTTCAACATCACACCTTCCAAGCCACATTTCTGCATCTTTTGGAAATGCTCCTACCACACTACTAAATGGTCTAAGTTTCAGTGACCAGTTTCATGAATCAAGAGCCAAACAAATCTTCTCACCACCAAACCATGCCTCATCACATACGTTCTCAACAATCACTCTAGACCTGACTTCTTCAGCTCCTTCCTCCTCATCAACTCAGTTCCACCATGGCTTACCTTCAACCATGGCTTCAATTTCAAACCCAAGATCCTCAGCTAGTCTCAGCTTTTGTTCACCGGAGCATAACTTCATACCATCCATTTGGGGTAAGGGGTTCCATGACAATGGCACAACCACAACACCAGTTGACAGAGTCCCCACAAGGCCAATTATGCAGCCAAATAATTTCCTACAACATTTCTACCAACAACGCATAACAAGCCAAACTCCCTCCAGAGAAGCTTTGGCAGAAACAATAACCAAAGCAATCAGCACAGACCCGAGTTTTCGTTCAGTAATAGCTGCTGCAGTTTCATCAATAGTGGAACATGGATCAAACAGTGGTAAACAAGAGGTATCAGAGGATATTCTTGGTTCAGGGTTGAACTTGAAACTTGGGGAGCATCATCAATCGGCTTCACCAAACCCCTTGAACCAGAACGGGAAAGGATGCTTAACAGGCTACTTCAAAAGTTTATCCTCCAAGAGTTCTGAGTCTGGAAACGTCCTTCTTCTCCAACCACCATTGCCGTTTTCTTTCTCCAAGAGTGTCACAAATCAGATCAATCGCTATGTTCCAGAAATGAACACGCATCACTAG 1620 0.4383 MSSPGSPKIEEKIITKEDKVKSAKTEMGEVKEENERLKKTLERVEKDYHSLQLRFFDILHKDVSKKGVVDSSTSHEDQSEEPEFVSLCLGRTPTEPKKEAIIGNSNKPTEKEVGPNLTLGLDSKHLLEMEVVSDLSPMNSSEEPKETQTEGTLSTNQSAKVINVNTDISDQMPAKRARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPTCPVRKQVQRCSEDLSILITTYEGTHNHKLPVSATAMASTTSAAASMLLSGSSTSHLPSHISASFGNAPTTLLNGLSFSDQFHESRAKQIFSPPNHASSHTFSTITLDLTSSAPSSSSTQFHHGLPSTMASISNPRSSASLSFCSPEHNFIPSIWGKGFHDNGTTTTPVDRVPTRPIMQPNNFLQHFYQQRITSQTPSREALAETITKAISTDPSFRSVIAAAVSSIVEHGSNSGKQEVSEDILGSGLNLKLGEHHQSASPNPLNQNGKGCLTGYFKSLSSKSSESGNVLLLQPPLPFSFSKSVTNQINRYVPEMNTHH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0437 539 MobiDBLite consensus disorder prediction 97 116 - -
Pvu8g0437 539 Coils Coil 13 54 - -
Pvu8g0437 539 ProSiteProfiles WRKY domain profile. 185 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0437 539 MobiDBLite consensus disorder prediction 10 31 - -
Pvu8g0437 539 Gene3D WRKY domain 175 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0437 539 MobiDBLite consensus disorder prediction 1 31 - -
Pvu8g0437 539 SUPERFAMILY WRKY DNA-binding domain 183 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu8g0437 539 MobiDBLite consensus disorder prediction 134 154 - -
Pvu8g0437 539 SMART WRKY_cls 190 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0437 539 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 19 528 - -
Pvu8g0437 539 Pfam WRKY DNA -binding domain 191 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu8g0437 539 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 19 528 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0437 Pvu-Chr8 3709079 3711997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0437 27 499 WRKY Transcription Factor Family AT5G15130 42.969 5.17e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu8g0437 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0437 - - gmx:100780402 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0437 8 3709079 3711997 Pvu8g0437 8 3709079 3711997 ECH
Pvu8g0437 8 3709079 3711997 Pvu3g1984 3 40445375 40449886 ECH
Pvu8g0437 8 3709079 3711997 Pvu9g1959 9 28139133 28142787 ECH
Pvu2g0925 2 14907240 14909229 Pvu8g0437 8 3709079 3711997 ECH