Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0416 ATGTCAAAAAAGCTCTCGTACAATTCTTCCTTGATCGCACCTTTGCTTCACAATGATGAGGAGAAAGCCATAGCCTCCCATCCTTCTGCCAAAAATACTGTATCCTTCTTTCGTACCTGCCTTAATGGACTCAATACAATAGCAGGTGTTGGCATTCTCTCAGTTCCATATGCTCTTGCAACAGGAGGCTGGTTAAGCTTGGCTCTTCTGTTTTCTATTGCCGCTGCTGCATTTTACACGGGCCTTCTCATTAAACGATGCATGGACAAGAACTCAAACATTAGAACCTACCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGAAGGCTAATAGTGTCAGTATCCATGTACACCGAACTCTATTTAGTTTCAATAGGATTCTTGATTCTTGAAGGTGATAACTTGAGCAACATGTTCCCCATTGGGGAGGTTCAGATAGCTGGCTTAGCAATTAGTGGGAAGCAATTCTTTGTGATAATGGTTGCCCTTATCATCTTGCCCACAGTTTGGTTGGATAACTTGAGTCTACTCTCTTACTTATCTGCAAGTGGAGTCTTTGCTTCTGCTGTCATCATCCTTTCAATAACATGGACTGCAACAGTTGATGGAGTTGGTTTTCATCATAAAGGAAGTACTCTGGTGAATTGGAATGGTCTCCCCACAGCTGTTAGCTTGTATGCCTTTTGTTACTGTGCACATCCTGTGTTTCCCACATTGTACAATTCTATGACAAACAAACATCAGTTCTCTAACGTCCTGCTTGTATGTTTTATCATAACCACTGTGGGTTATGCATCCATGGCTGTAATTGGTTATTTAATGTTTGGTGATGAGGTTGAATCACAGATAACATTAAACCTGCCTCTGGACAAAGTTAGCTCAAAATTAGCAATATACACTACCTTGGTTAATCCCATATCCAAGTTTGCTTTGATGGCAACACCTATTACAAATGCTTTGAAAGATTTGCTTCCAAGGACGCACAAGAATAGGTTGACCAGCATCTTAGTAAGCACAGTCTTGGTAATGAGCACTACCATTGTTGCCCTTGCTGTTCCTTTCTTTGGGTCTCTCATGTCCCTGGTTGGAGCCTTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCAGGCACTTACAGGAAATTTGGGGGTGAAACGGTAGCCATTATCATGATAATAATGGCTGCTATAGTAATGGCAATTTCTGGGACCTACGTCTCTCTCATGGAAATAGTCCAACATTTGTAA 1272 0.4143 MSKKLSYNSSLIAPLLHNDEEKAIASHPSAKNTVSFFRTCLNGLNTIAGVGILSVPYALATGGWLSLALLFSIAAAAFYTGLLIKRCMDKNSNIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNMFPIGEVQIAGLAISGKQFFVIMVALIILPTVWLDNLSLLSYLSASGVFASAVIILSITWTATVDGVGFHHKGSTLVNWNGLPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFIITTVGYASMAVIGYLMFGDEVESQITLNLPLDKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPRTHKNRLTSILVSTVLVMSTTIVALAVPFFGSLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGGETVAIIMIIMAAIVMAISGTYVSLMEIVQHL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0416 423 Pfam Transmembrane amino acid transporter protein 33 414 IPR013057 -
Pvu8g0416 423 PANTHER OS05G0424000 PROTEIN-RELATED 31 420 - -
Pvu8g0416 423 PANTHER AMINO ACID TRANSPORTER AVT1J 31 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0416 Pvu-Chr8 3427803 3429624 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0416 20 420 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.711 2.03e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0416 K15015 - gmx:100794374 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0416 8 3427803 3429624 Pvu8g0416 8 3427803 3429624 ECH