Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0409 ATGGGATCCTGTTTCTCAGAGAAGGAGAATCATGTTGTGGTGGAAAGAGAGGACACTGAAACCACCCTCAGTGCCATGGTGCTGGGTTCCAACGTGGTGTTTCCCGCGGCTCTAAACGCTGCAATTGAGCTCAACGTGTTTGACATAATTGCTAAGGAAGGTTCAGCAGAGAGTGGTGGGTTCATGTCACCCTCTGAAATCGCTTCCAAGTTATTAATACCAACACAGCAACAACACCGCTGTGAGTTGGCCAATAGGCTGGAGCGTTTGTTGCGATTGCTTGCTAGCTACTCTCTTCTCGCTGTTTCTTCTCGCAGCGATGGAGATGGTGGCAGCGTGAGAGTTTATGGGGTGTCACCGTCGGGTAAATACTTCGTGCGTGATGTAAGTGGTGAGGGTTACCTCGCTTCTTTCACCTCGTTTCTGTGTCACCCTGCATTATCCGGGGTGTGGGTGAATTTTAAGGAAGCGATTATTGATCCTGAGATTGACCTTTTCAAGAAGGTTCATGGAATGTCCAAGTTCGAATACTTTGGGAAATATCCTGAAATAAACCACGGAATATCAACTTTGGTTGATGTAGGAGGTGGAACTGGACAGTGTCTCAAAATGATCATCTCCAAACACCCTTCAATTAAGGGAATTAATTTTGACCTCCCACATGTAATTGAAAACTCACCACCCGTTCCAGGGGTTGAGCATGTTGGAGGGAATATGTTTGAAGGTGTGCCACAGGGTGATGCCATCATGCTTAAGGCTATATGCCATAATTGGTCCGATGAAAAAGCTGTAGAACTTCTGAGCAATTGTCACAAAGCTTTGCCACCAAAGGGGAAGGTCATTGTTGGGGATTTCATACTGCCAGAAGACCCAGAACCTACAAATGAACATAAAATGATTTCAATACTTGATAACATTATGTTCATTACTCCTGGTGGAAGGGAAAGAACTGAGAAAGAATTTGAGAGTCTGGGCAAGAGTTCTGGATTTTCTAGGTTTCAAGTTGTCTGTCGTGCTTTCTCTACTATGGCACTGATGGAATTTTACAAATAA 1053 0.4463 MGSCFSEKENHVVVEREDTETTLSAMVLGSNVVFPAALNAAIELNVFDIIAKEGSAESGGFMSPSEIASKLLIPTQQQHRCELANRLERLLRLLASYSLLAVSSRSDGDGGSVRVYGVSPSGKYFVRDVSGEGYLASFTSFLCHPALSGVWVNFKEAIIDPEIDLFKKVHGMSKFEYFGKYPEINHGISTLVDVGGGTGQCLKMIISKHPSIKGINFDLPHVIENSPPVPGVEHVGGNMFEGVPQGDAIMLKAICHNWSDEKAVELLSNCHKALPPKGKVIVGDFILPEDPEPTNEHKMISILDNIMFITPGGRERTEKEFESLGKSSGFSRFQVVCRAFSTMALMEFYK* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0409 350 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 350 IPR016461 GO:0008168
Pvu8g0409 350 Pfam Dimerisation domain 37 95 IPR012967 GO:0046983
Pvu8g0409 350 Pfam O-methyltransferase domain 187 331 IPR001077 GO:0008171
Pvu8g0409 350 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 186 - -
Pvu8g0409 350 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 187 350 - -
Pvu8g0409 350 PIRSF O-mtase 180 350 IPR016461 GO:0008168
Pvu8g0409 350 PIRSF O-mtase 3 186 IPR016461 GO:0008168
Pvu8g0409 350 CDD AdoMet_MTases 190 287 - -
Pvu8g0409 350 SUPERFAMILY "Winged helix" DNA-binding domain 17 128 IPR036390 -
Pvu8g0409 350 PANTHER O-METHYLTRANSFERASE 1 186 IPR016461 GO:0008168
Pvu8g0409 350 PANTHER O-METHYLTRANSFERASE 187 350 IPR016461 GO:0008168
Pvu8g0409 350 Gene3D - 33 178 IPR036388 -
Pvu8g0409 350 Gene3D Vaccinia Virus protein VP39 164 339 IPR029063 -
Pvu8g0409 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 347 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0409 Pvu-Chr8 3377029 3379244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0409 14 350 Monolignol Biosynthesis Gene Families AT5G54160 45.730 2.76e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0409 - - pvu:PHAVU_008G040200g 674.085