Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0397 ATGGCAGCGTTCGTAATCAGGGTTTCACTGGACGGAACCGCTGATTTCCTAACGGTGCAGGAGGCGATCGACGCCGTGCCACTTGGCAACATTCGCCGGACGGTGATTCGGGTCTCGCCGGGAATCTACCCACAGCCGGTGTACATCCCCAAAACCAAGAATTTCATCACTCTCGCTGCTCTGTCCCCTGAGGAAACTGTGCTTACCTGGAACAACACTGCCGCCGGAATCAATCACCATCAACCTGCGAGGATGATAGGGACTGGGACCTTCGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATTACTTTTGAGAATTCTGCCCCTCAGGGTTCGGGGCAAGCAGTTGCAATTAGAGTAACAGCAGATCGATGTGCCTTCTACAATTGTAGGTTCCTTGGATGGCAGGACACATTGTACTTGCATTACGGTAAACAATATTTGAAAGATTGTTACATTGAAGGAAGTGTGGACTTCATCTTTGGTAATAGCACTGCACTTTTGGAGAATTGTCATATCCATTGCAAGTCTGAGGGCTTCATAACTGCACAGAGCAGAAAATCATCACAGGAAACAACTGGTTATGTATTCTTAAGATGCGTTATCACAGGTAATGGAGGAAATTCTTATGCATATCTTGGGCGACCGTGGGGCCCTTTCGGAAGGGTGGTCTTTGCATACACTTACATGGATCAGTGTATAAAACATGTTGGCTGGGATAACTGGGGGAAAATGGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGTTGCTCTCCACCGAAGCGAGTAACATGGTGTAGAGAATTGTTGGATGAAGAAGCTTTGCAGTTCCTCACACATCCTTTCATCGATCCAGAACCAGAGAAACCTTGGCTTGCTCAAAAGATGGCCCTCAGAATTCCATACTCTGCATGA 951 0.47 MAAFVIRVSLDGTADFLTVQEAIDAVPLGNIRRTVIRVSPGIYPQPVYIPKTKNFITLAALSPEETVLTWNNTAAGINHHQPARMIGTGTFGCGSTIVEGEDFIAENITFENSAPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLENCHIHCKSEGFITAQSRKSSQETTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYMDQCIKHVGWDNWGKMENERSACFYEYRCFGPGCSPPKRVTWCRELLDEEALQFLTHPFIDPEPEKPWLAQKMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0397 316 PANTHER PECTINESTERASE 1 315 - -
Pvu8g0397 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Pvu8g0397 316 Gene3D - 3 310 IPR012334 -
Pvu8g0397 316 SUPERFAMILY Pectin lyase-like 2 298 IPR011050 -
Pvu8g0397 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Pvu8g0397 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0397 Pvu-Chr8 3292853 3296713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0397 5 309 Carbohydrate Esterase AT5G47500 38.291 1.33e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0397 K01051 - gmx:100786786 627.861