Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0392 ATGATCAGATTGCATAAACTTTTGGGAAACAGGTGGTCTCTGATTGCAGGAAGACTTCCAGGAAGAACTTCAAATGATGTGAAGAATTACTGGAACACCTACACACGACGCAAATTACACACTCACAACAAAGTAAAGCAATCAACATTGAAACCCCATGAAGTTATAAAGCCTGTACCAAAAGCTTTGTCAAAAACTTGCCCCAAGTTACTGCAAGGCAACGTTATAAATAGTTCGAAAGTTGGTGTTAGTGAACAAGGTGTAACTTCTTCGTCAAATTGGTGGGAAACTCTTTTAGATGAAAAGGGAGAGAATAATATTACAGTGAACAATACATGCTTCTCTGGAGAGAAAGATGGAGTGTTTGAACTATGGAATCAAGAACTTACTTCAATTGATTCTCACTTTCTTACAGAAGCAGAAACTTGGAGCGATATGTTTCTTGACCTAGGAGTTAATTAG 462 0.3766 MIRLHKLLGNRWSLIAGRLPGRTSNDVKNYWNTYTRRKLHTHNKVKQSTLKPHEVIKPVPKALSKTCPKLLQGNVINSSKVGVSEQGVTSSSNWWETLLDEKGENNITVNNTCFSGEKDGVFELWNQELTSIDSHFLTEAETWSDMFLDLGVN* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0392 153 SUPERFAMILY Homeodomain-like 2 42 IPR009057 -
Pvu8g0392 153 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 39 IPR017930 -
Pvu8g0392 153 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 97 - -
Pvu8g0392 153 ProSiteProfiles Myb-like domain profile. 1 35 IPR001005 -
Pvu8g0392 153 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 97 - -
Pvu8g0392 153 Pfam Myb-like DNA-binding domain 2 34 IPR001005 -
Pvu8g0392 153 CDD SANT 2 34 IPR001005 -
Pvu8g0392 153 SMART sant 2 37 IPR001005 -
Pvu8g0392 153 Gene3D - 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0392 Pvu-Chr8 3254754 3257178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0392 1 130 MYB Transcription Factor Family AT4G09460 35.971 1.25e-18 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu8g0392 Myb_DNA-binding 3.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0392 - K16166 pvu:PHAVU_008G038500g 320.857