Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0391 ATGGAAGGATCATCATCAGGTGTGAGAAAAGGAGCATGGAGTAAATTTGAAGATGAACTTCTCAAAGCATGCGTTCATCTTCACGGAGAAGGAAAATGGTACCTCGTTCCTCAAAGAGCAGGGTTGAACAGATGCCAGAAGAGTTGTAGATTGAGATGGTTGAACTATTTGAAACCAAATATAAAGCGAGGAGATTTTAGTGAAGATGAAATTGATTTGATGATCAGATTGCATAAACTTTTGGGAAACAGGTGGTCCCTGATTGCAGGAAGACTTCCGGGAAGAACTTCAAATGATGTGAAAAATTACTGGAACACCTACACACGACGTAAATTACACTCTCAGAACAGAGTAAAGCAATCAACATCAAAAACTTGTCCCAACTTACTGCAAGGCGAATTTATAAACACTTCCAAAGTTGGTGTTAGTAAAGAAGGTGCAGCTGCTTCGTCAAATTGGTGGGAAACTCTGTGTGATGAGAATATTACAGTGAACAATACATGCTTCTTTGGAGAGGAAGATGCGGTGTTTGATGAACTATGGAATCAACAACTTACTTCAATTGATTCTCACTTTCTTACAGAAGCTGAAACTTGGAGCCAAATCTTTCTTGACCTAGAAATTAATTAG 630 0.3873 MEGSSSGVRKGAWSKFEDELLKACVHLHGEGKWYLVPQRAGLNRCQKSCRLRWLNYLKPNIKRGDFSEDEIDLMIRLHKLLGNRWSLIAGRLPGRTSNDVKNYWNTYTRRKLHSQNRVKQSTSKTCPNLLQGEFINTSKVGVSKEGAAASSNWWETLCDENITVNNTCFFGEEDAVFDELWNQQLTSIDSHFLTEAETWSQIFLDLEIN* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0391 209 SUPERFAMILY Homeodomain-like 7 104 IPR009057 -
Pvu8g0391 209 PANTHER TRANSCRIPTION FACTOR MYB113-RELATED 7 124 - -
Pvu8g0391 209 CDD SANT 12 57 IPR001005 -
Pvu8g0391 209 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Pvu8g0391 209 Pfam Myb-like DNA-binding domain 63 107 IPR001005 -
Pvu8g0391 209 Gene3D - 10 62 - -
Pvu8g0391 209 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Pvu8g0391 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 57 IPR017930 -
Pvu8g0391 209 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 124 - -
Pvu8g0391 209 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Pvu8g0391 209 SMART sant 62 110 IPR001005 -
Pvu8g0391 209 SMART sant 9 59 IPR001005 -
Pvu8g0391 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Pvu8g0391 209 CDD SANT 66 107 IPR001005 -
Pvu8g0391 209 Gene3D - 65 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0391 Pvu-Chr8 3242793 3245044 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0391 1 111 MYB Transcription Factor Family AT1G66370 69.369 1.71e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu8g0391 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0391 - K16166 pvu:PHAVU_008G038400g 441.425