Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0386 ATGGAGAACGTTTGCAAAACAAGTAAGGAAAACCAGCAGTTGAAGTTGCCAACAGGTTTTAGATTTCACCCAACAGATGAAGAACTCATAAAACACTACCTCACAAAGAAGGTTGTTGACAACTGTTTCTGTGCTGTGGCCATTGGTGAGGCTGATTTGAACAAGTGTGAGCCATGGAATCTGCCTGGATTGGCTAAAATGGGTGAAACTGAGTGGTATTATTTCTGTGTGAGGGACAAAAAGTACCCAACTGGTTTAAGGGCTAATAGGGCTACTGAAGCTGGTTATTGGAAAGCCACAGGGAAAGACAGGGAGATAATAGCGGAAAATGCACTCATTGGGATGAAGAAAACCTTAGTTTTCTACAAGGGAAGAGCTCCAAAAGGTGAAAAGACAAACTGGGTTATGCATGAATATAGGTTGGAAGGGATACAGAATCAACACAAATCTGCAAAGAGCGAATGGGTGGTGTGCAGAGTCTTTGAGAAGGGTCCTTGTGGAAAGAAATTGCATGTTCCAAATCGTGAGAGGTTCAATTCCTCTGGAAATGAATCATCATCACCTTCTGCTCAATTGCCTCCTTTGATGGATTCTCCTCCAGACAACAGTGAAACAATAACCACTGCCGGTGAGTTGTCTCAGGTGACCAGCTGTGATCCAAATCAAACTATGGATCCAAACACACATGATGACATTCTTCACAGCTTGGAAACTCCTATGTTGGACTTTTCATCCTCTGCAACTCCTTATGATGTTTTCCCTTCAGGCAAAGCAACCCTTTCAGGCATAAACCAGCCAACCCAGATTGCACACCAGATTGGGGACTCACAGTACCCAGATTATTGTTATATGCCTCAAGAACAGTCCTTGAGGATGCTGATGGGAAACCATGAATCAAGTGCAAAGCAAATTCAGAAAGCAGAGTTTTCTGAGGGAAGAGAATTTGAAGCTGATATCTCATCTGTGTTATACAACAGTGACATGATGCAAAGAATGTTTGAGAATCAAGAACATTCATCAGCTTCTGCAGGACATGTGGACACTGATAGCATGTGGAATTACTGA 1065 0.4263 MENVCKTSKENQQLKLPTGFRFHPTDEELIKHYLTKKVVDNCFCAVAIGEADLNKCEPWNLPGLAKMGETEWYYFCVRDKKYPTGLRANRATEAGYWKATGKDREIIAENALIGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGIQNQHKSAKSEWVVCRVFEKGPCGKKLHVPNRERFNSSGNESSSPSAQLPPLMDSPPDNSETITTAGELSQVTSCDPNQTMDPNTHDDILHSLETPMLDFSSSATPYDVFPSGKATLSGINQPTQIAHQIGDSQYPDYCYMPQEQSLRMLMGNHESSAKQIQKAEFSEGREFEADISSVLYNSDMMQRMFENQEHSSASAGHVDTDSMWNY* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0386 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 351 - -
Pvu8g0386 354 ProSiteProfiles NAC domain profile. 16 163 IPR003441 GO:0003677|GO:0006355
Pvu8g0386 354 PANTHER ANAC079/ANAC080/ATNAC4 PROTEIN 9 351 - -
Pvu8g0386 354 MobiDBLite consensus disorder prediction 171 206 - -
Pvu8g0386 354 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Pvu8g0386 354 SUPERFAMILY NAC domain 12 163 IPR036093 GO:0003677|GO:0006355
Pvu8g0386 354 MobiDBLite consensus disorder prediction 176 206 - -
Pvu8g0386 354 Gene3D NAC domain 25 165 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0386 Pvu-Chr8 3177057 3179391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0386 14 354 NAC Transcription Factor Family AT5G07680 48.844 1.94e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu8g0386 NAM 3.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0386 - - gmx:100782172 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0330 4 3256755 3258663 Pvu8g0386 8 3177057 3179391 PCT