Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0357 ATGGAATACGGAAATTGGGCTGATTCGCTGCAAACTGAAACCCCACTCCTTTCTTTCCCCCAACCTTCCTCCTCCTATGCTCCTCCATCATCTCAGATTACCCATTACCCCTCTTATCCCCAAAACCCTAATCCCTCTTCTTCTCTTCCCCTCAACCCTCCTGGGGTTGATTCCCACCCGCCGTTGAACCCTATCATGTATTCGGATCATGAATCTGTTCCCATTCCCAATTTGATCTATCCTCAGAACCTTGTTGGGGCTGATTCCAACTCATTTGTGCCTTCTTCTGGATACTATGTGGACCAGAACTGGGCTGCCAGAGAGGCTGTTAGGCAATTTGGTTCTAACCCAGCTGTCTATGCACCTGGCATCTCTATACCATCCAATGGCTCGGAACAGTTGGGTATGGTAGATCCTATCTCCATGTGGTGGGCAAATAATGCAGCTCAACTTCATGGCAATGGAATACTGAATAAAAAACAGAAGAAAGCTAAAACTAAGGTTGTGCAACCTGCATATTGTGAAGTTTGCAAGATAGAATGCACCGGCAAGGAAGTGCTGGACCAACATAAATTAGGAAAGAAGCACAAGAGGAACTTGGAAAAACTAAGAGAATCATTGAACCCAACCCAAGTTCAACCATCTGGGTCTTCTAATCCTGTAATAGGACCCCAGTTACCATACGACAAGAGCAAATCAACCAGTGTGAACAATATTAAGAGAAAAAAAGTTGAAACTGTTGAAGACTTGGAAAAAAAGAAAAAGAAGGTTCTTGATGGTGGGGCAGCAGCCGAAGCAGTTAAGATTTGTGCTATATGTAACGTGGTGTGTAATAGTGAGACAGTCTATAATTACCATCTTACTGGACAAAAGCATGCTTCTATGCTGAAGAAAGCATTTCATCATACACAGTCCTATGCCAGTTGA 927 0.4369 MEYGNWADSLQTETPLLSFPQPSSSYAPPSSQITHYPSYPQNPNPSSSLPLNPPGVDSHPPLNPIMYSDHESVPIPNLIYPQNLVGADSNSFVPSSGYYVDQNWAAREAVRQFGSNPAVYAPGISIPSNGSEQLGMVDPISMWWANNAAQLHGNGILNKKQKKAKTKVVQPAYCEVCKIECTGKEVLDQHKLGKKHKRNLEKLRESLNPTQVQPSGSSNPVIGPQLPYDKSKSTSVNNIKRKKVETVEDLEKKKKKVLDGGAAAEAVKICAICNVVCNSETVYNYHLTGQKHASMLKKAFHHTQSYAS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0357 308 PANTHER - 21 305 - -
Pvu8g0357 308 Pfam Zinc-finger of C2H2 type 173 196 - -
Pvu8g0357 308 Pfam Zinc-finger of C2H2 type 269 292 - -
Pvu8g0357 308 MobiDBLite consensus disorder prediction 205 235 - -
Pvu8g0357 308 Gene3D Classic Zinc Finger 157 203 - -
Pvu8g0357 308 Gene3D Classic Zinc Finger 238 299 - -
Pvu8g0357 308 Coils Coil 236 256 - -
Pvu8g0357 308 SMART ZnF_U1_5 169 203 IPR003604 GO:0003676|GO:0008270
Pvu8g0357 308 SMART ZnF_U1_5 265 299 IPR003604 GO:0003676|GO:0008270
Pvu8g0357 308 MobiDBLite consensus disorder prediction 14 67 - -
Pvu8g0357 308 PANTHER ZINC FINGER RNA-BINDING PROTEIN 21 305 - -
Pvu8g0357 308 MobiDBLite consensus disorder prediction 14 42 - -
Pvu8g0357 308 SUPERFAMILY beta-beta-alpha zinc fingers 166 204 IPR036236 -
Pvu8g0357 308 MobiDBLite consensus disorder prediction 205 234 - -
Pvu8g0357 308 MobiDBLite consensus disorder prediction 43 60 - -
Pvu8g0357 308 SUPERFAMILY beta-beta-alpha zinc fingers 267 300 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0357 Pvu-Chr8 2921636 2924762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0357 168 299 C2H2 Transcription Factor Family AT5G61190 34.091 1.10e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0357 - - gmx:100814580 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0357 8 2921636 2924762 Pvu8g0357 8 2921636 2924762 ECH