Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0336 ATGCCACAAGCACGAGACCGAGACAACACTCACAGCATCCATCATTACATTTCTTCAACACCCACAACAACAGCACAATCTCCAATGACCAATTTGCCGCGAGATCTGTTGAGAACCTTCATGGGAGTGAACAATCATCACGGCCACCATGTTAATCATCAGAATTTGCCTGTGCCGGTGGTGAAGTTAGAGGAAGAAGAGGACTTGGAGCTAAGTCTCGGGCTTTCGATGAACGGTCGATTTGGGGTGGACCCCACTGCCAAGAAGATAAAGAGAACTACGTCGATTCCTGAGTTCGTGAGAGACGAGGAGATGGGGTACGCTGTGGTGGGGTGCACGGGGACTCTGGTGAGGACGTGCTCGCTGCCGACGGAGACGGAGGAGGAGTGGCGGAAGAGGAAGGAGTTGCAGACGCTGCGCCGCATGGAGGCTCGGAGGAAGCGCTCCGAGAAGCAGAGGAATTTGAAGGCTCTCAGAGAACAACAACAGCAACAGAGGGTTGGGTCTGAAGGGAATAATCCTGTGGATCAAGGTGCAGGGGCTCACCCTGAGGTTGCACCCTTGGGGAGAACCGTGTCGTTGACCACACGCGTTTGTGGACTCGGTTTGAATGGGGACAGTGAGAAAGAGAAGAAGGAGAAGGGTGGAGTAGTGTTGGCGCCTCCATCACCTTCGCAGGGTTCCATTGGTTCTTCGGGGACCTCAGAACTTGAGTCTCAACAAGGTCAAGGACCAACACCAATGGATGTTAGAAGCCCTACTAGTGCCAACTTGGTGCCAGACAGGGAGCTGAAATCACCAATTGCCACCCAAGCAAGTGTTGCAGAGAACGCAGTAAAGAATGCTGCTGCAGTGGCTATGAGAAGTCAATCTAACAAACATTCACCACCCCAGAACAGAACCAAAGACATTGTGAGGAACCTGTTGGAGGACATGCCCTGTGTCTCCACAAAAGGTGATGGTCCTAATGGAAGAAGAGTGGAAGGTTTTCTTTACCGGTATGGGAAAGGTGAGGAGGTGAGAATAGTGTGTGTTTGCCATGGCAGTTTTCTCACCCCTTCAGAGTTTGTTAAGCATGCTGGTGGCGGTGACGTGGCAAACCCATTGAAGCATATTGTTGTTAGTCCAAGCATTTTGTGA 1140 0.5149 MPQARDRDNTHSIHHYISSTPTTTAQSPMTNLPRDLLRTFMGVNNHHGHHVNHQNLPVPVVKLEEEEDLELSLGLSMNGRFGVDPTAKKIKRTTSIPEFVRDEEMGYAVVGCTGTLVRTCSLPTETEEEWRKRKELQTLRRMEARRKRSEKQRNLKALREQQQQQRVGSEGNNPVDQGAGAHPEVAPLGRTVSLTTRVCGLGLNGDSEKEKKEKGGVVLAPPSPSQGSIGSSGTSELESQQGQGPTPMDVRSPTSANLVPDRELKSPIATQASVAENAVKNAAAVAMRSQSNKHSPPQNRTKDIVRNLLEDMPCVSTKGDGPNGRRVEGFLYRYGKGEEVRIVCVCHGSFLTPSEFVKHAGGGDVANPLKHIVVSPSIL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0336 379 Coils Coil 132 161 - -
Pvu8g0336 379 MobiDBLite consensus disorder prediction 14 29 - -
Pvu8g0336 379 PANTHER NINJA-FAMILY PROTEIN AFP3 29 378 - -
Pvu8g0336 379 MobiDBLite consensus disorder prediction 202 258 - -
Pvu8g0336 379 Pfam Tify domain binding domain 340 374 IPR032308 -
Pvu8g0336 379 Pfam Putative nuclear localisation signal 116 237 IPR032310 -
Pvu8g0336 379 Pfam Ethylene-responsive binding factor-associated repression 64 98 IPR012463 -
Pvu8g0336 379 MobiDBLite consensus disorder prediction 224 253 - -
Pvu8g0336 379 MobiDBLite consensus disorder prediction 158 172 - -
Pvu8g0336 379 MobiDBLite consensus disorder prediction 141 157 - -
Pvu8g0336 379 MobiDBLite consensus disorder prediction 141 189 - -
Pvu8g0336 379 PANTHER AFP HOMOLOG 2 29 378 IPR031307 GO:0007165
Pvu8g0336 379 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0336 Pvu-Chr8 2721694 2725030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0336 - - vun:114185130 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0336 8 2721694 2725030 Pvu8g0336 8 2721694 2725030 ECH