Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0333 ATGGCTTCAAATGATGGCAGTAAAGCAAGTGAAATCTTTCGAGGTCAAGTTCACTTGTACAAACACTTGTTTGCCCATACAATAGATGCTATGAGTCTTAAATGGATGGTTGAGCTTAGCATACCAGACATAATCCACAACCATGGTCAACCTATTACATTTCAAAAGTTGGTGTCCATTCTACAAGTTTCACCAACCAAAGTTAGAGGTGTGCAGAGTCTCATACACTACCTAGCACACACTGGATTCTTTGAGATAGTTAGTGTCCATGAGAATATGGAGGAAAAGGAAGCATATGCTCTAACTGCTGCATCACAGCTTCTTGTCAAAGACAGTGACCTTTGTCTAGCACCAACGGTAGAGGGTTTTGTTGACCCAGGTTTAACTGGTGTATGGTCTAACCTGAAGAAGTGGACTTATGAGGATGATCTCACACTATTTGGTGTCTCAGTAGGATCAAATCTGTGGGAATTTCTTGATAAAAATCCTGCATCTGACGAGGCATTCAATGAGACATTGGCTGCTGATTCTAAGATGATGAACATGGCATTGAAAGGTTGCAATTGGGTGTTTGAGGGAGTGGAGTCCATTGTGGATGTTGGCGGTGGAACTGGAATCACAGCCAACACAATATGTGAGGCATTTCCTAACATGAAATGCATTGTGTTGGAACGTCCACACATGTTTAAATCTATTCCAAAGGCTGATGCAGTTCTACTTAAGATGGTTTTACATAATTGGAATGACAAGGATTGTAGAAAGATATTAGAAAATTGTAAAGAAGCTATTTCTGATAAAGGTAAAAGGGGAAAAGTAATTGTTGTAGATATTGTGATGAATGAAAGCGAAGATGAGGAAGAACTTAATGAACTAAAACTTCTCTATGACGTAAGGATGACATGTCTCATTAATGGAAAAGAGAGAAAAGAAGAAGAGTGGAAGAAACTATTTGTGGAAGCAGGATTCCAGAGCTATAAAATATCCCCTTTCACAGGATATCTCTCTCTTATTCAGATATATCCTTGA 1026 0.3899 MASNDGSKASEIFRGQVHLYKHLFAHTIDAMSLKWMVELSIPDIIHNHGQPITFQKLVSILQVSPTKVRGVQSLIHYLAHTGFFEIVSVHENMEEKEAYALTAASQLLVKDSDLCLAPTVEGFVDPGLTGVWSNLKKWTYEDDLTLFGVSVGSNLWEFLDKNPASDEAFNETLAADSKMMNMALKGCNWVFEGVESIVDVGGGTGITANTICEAFPNMKCIVLERPHMFKSIPKADAVLLKMVLHNWNDKDCRKILENCKEAISDKGKRGKVIVVDIVMNESEDEEELNELKLLYDVRMTCLINGKERKEEEWKKLFVEAGFQSYKISPFTGYLSLIQIYP* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0333 341 Gene3D - 1 108 IPR036388 -
Pvu8g0333 341 PANTHER O-METHYLTRANSFERASE 2 340 IPR016461 GO:0008168
Pvu8g0333 341 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 337 IPR029063 -
Pvu8g0333 341 Gene3D Vaccinia Virus protein VP39 109 227 IPR029063 -
Pvu8g0333 341 Gene3D Vaccinia Virus protein VP39 228 341 IPR029063 -
Pvu8g0333 341 PIRSF O-mtase 1 341 IPR016461 GO:0008168
Pvu8g0333 341 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Pvu8g0333 341 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 341 IPR016461 GO:0008168
Pvu8g0333 341 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 340 - -
Pvu8g0333 341 Pfam O-methyltransferase domain 228 323 IPR001077 GO:0008171
Pvu8g0333 341 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0333 Pvu-Chr8 2695482 2698133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0333 91 341 Monolignol Biosynthesis Gene Families AT1G51990 29.889 1.06e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0333 K22588 K13262 gmx:100811609 502.286