Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0310 ATGGACACAAGCTGCACACAAACTGCTTTAGGCACCATCCTCCTCCTCTTTCTGTTGTCGTGCCTTTCCATAGCAGATGTTATCTATCGTCCTCCTGATCTCTTCAGCATCAGCTGTGGCTCTTCCACCAACTTCTCCACCCCTGATACGAGGAATTGGACTTCAGACATCAAATTCCTCTCTCCAACCCATAACTCAGTAGATCTTCCTCCACTCATACCATCTATCCCACAGGGTCCTCCTTACGACCATGCTCGTCTCTCTCACTCCCTGTTCACCTATTCATTTCCTGTCACCCCAGGCCCTAAGTTCCTTCGCCTTTTCTTCTACTCCACCTCATACCCAAACTTTGATAGCTCCAAAGCCTTTTTCTCAGTCAAAGCAGGCCCATACACCCTCCTTCAACATTTCAATGCTTCCCTCAATGCAGATTCTCAAAATGACCCCACTCACTCCAACATCTTATTCAGAGAGTATTGCATAAACCTCCAAGAAGGACAAAAGCTCAACATCACCTTCATGCCAAGCACCATAGATTCCTATGCTTTCATCAATGGAATCGAGATTGTTTCAATGCCCCCTTATCTCTACTACACCAGTCCTGACGTGGACGTCAATGGACTGCCCAAACCTGTTGACCCCTTGAACCCATTCCCCATTGAAAACGGCTTTGCTCTGGAGACAATGTACAGGTTAAGAAATGCGGACCAATATATTCCCCCGGCAGAGGACACAGGTATGCTCAGGAAATGGGATGTTGATAACAATTATGTAACAAGTCCAAGTGTAGAATCTCTTCTTATTGACGATACAACTAAGCTGAACTACACCAAGACTCCTAACTACACTGCACCAGACGAAGTGTACCGATCCTTGAGGAATATGGGAAATGATGGGTCTATGAACAAGGGGTTCAACCTCACATGGCAGCTTCCGGTTGATTTGGGTTTCACCTACTTGCTAATGTTACACTTTTGCCAGCTTAACCCGGAGATTATCAATCCTGGTGATCTCACCTTCTACATCTACATTCAGGACCGGCGGGTTGAAGAGTGGGCAGACGTCCTCAGTTGGAGCGATAATCAAAGGGGTGTACCAGTGGTTAGAAACTACACAGTTTTAATGCCCTCCAATCAGGACAAGGTAAATCTTTCACTTAAAATGCATCCTAACCCTAAAAGCTTGTGCTGGGACGCACAAATAAACGCAATTGAGCTCTTCAAAATCAACGACTCATCCGGTAATCTCGCTGGACCAAATCAAATCCCAAATAAGAAGAGCAGTGGCACCACGAGACCCCTAATTCCCGCTGTCGCCGGTGCAGTTTCTGGTGTCGTTTTACTCTCCTTTATAGTGGCTTTCTTCGTCATCAAACGCAAGCATAGCGTTGCCATCGACAAGGGTTCCAACCAAAAAGACGGAACTTCTCGCGGGGATGGTTCATCATCGCTACCAACCAATCTCTGCCGTCACTTCTCAATCGCAGAAATCAGGGCCGCCACAAACAACTTCGACGAACTCTTCGTCGTTGGAGTGGGAGGCTTCGGCAACGTGTACAAAGGCTACATCGACGACGGTTCAACACCTGTGGCAATCAAAAGGCTCAAATCGGATTCTCAGCAAGGTTTGAAAGAGTTCATGAACGAGATCGAAATGCTCTCTCAACTTCGTCATCTCCATCTTGTTTCTCTCATCGGTTACTGCTACGAGAGCAACGAGATGATACTCGTTTACCATTTCATGGATCGTGGAACCCTCCGTGACCATCTCTACTACACCGATAACCCGTCCCTGCCGTGGAAGCAAAGGGTCGAAATATGCATAGGTGTTGCACGAGGATTGCATTACCTGCATACAGGTGTGAAGCAGGTGATCATTCACCGTGACGTGAAGAGCAGCAATATCTTGTTGGATGAAAAATGGGTGGCCAAGGTTTCAGACTTCGGTTTATCCAGAATTGGGCCCACAGGTATTTCGATGAGTCATGTGAACACTCAGGTGAAAGGTAGCATAGGATACTTAGACCCGGAGTACTACAAACGACAGCGTTTGACGGAGAAGTCTGACGTGTACTCGTTTGGCGTAGTGCTCTTGGAAGTATTGTGTGGGAGACAACCTCTGGTCCACTGGGAGGAGAAGCAACGGATCTCAGTTGTTAAATGGGCGAAGCATTGCTATGAGAAGGGATGTCTGTGTGAGATTGTGGATCCTTCATTGAAGGGCCACATAGCAGCTCACTGTTTGCACCAATTTGGTGATATTGCGCTGAGCTGCTTGCAGGAGGATGGGGCCGAGAGACCCTCCATGAAAGACGTGATTGGGATGCTGGAGTTGGTTCTGCAGCTTCAGAATAGTGGTGTTGGTGAGGAGGTATCGAGCAGGGATGAGTGTAGCCAACATGGTGGAGATTATAGTAAGAGCACCGATGGAGATAATAGCAGCTGGAGGAGCAAGGAATCGTCTGTGTTGATCCCTGGTGACGTTTTCTCAGAGATTAAGGATCCAAAGGGACGATGA 2517 0.4748 MDTSCTQTALGTILLLFLLSCLSIADVIYRPPDLFSISCGSSTNFSTPDTRNWTSDIKFLSPTHNSVDLPPLIPSIPQGPPYDHARLSHSLFTYSFPVTPGPKFLRLFFYSTSYPNFDSSKAFFSVKAGPYTLLQHFNASLNADSQNDPTHSNILFREYCINLQEGQKLNITFMPSTIDSYAFINGIEIVSMPPYLYYTSPDVDVNGLPKPVDPLNPFPIENGFALETMYRLRNADQYIPPAEDTGMLRKWDVDNNYVTSPSVESLLIDDTTKLNYTKTPNYTAPDEVYRSLRNMGNDGSMNKGFNLTWQLPVDLGFTYLLMLHFCQLNPEIINPGDLTFYIYIQDRRVEEWADVLSWSDNQRGVPVVRNYTVLMPSNQDKVNLSLKMHPNPKSLCWDAQINAIELFKINDSSGNLAGPNQIPNKKSSGTTRPLIPAVAGAVSGVVLLSFIVAFFVIKRKHSVAIDKGSNQKDGTSRGDGSSSLPTNLCRHFSIAEIRAATNNFDELFVVGVGGFGNVYKGYIDDGSTPVAIKRLKSDSQQGLKEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYHFMDRGTLRDHLYYTDNPSLPWKQRVEICIGVARGLHYLHTGVKQVIIHRDVKSSNILLDEKWVAKVSDFGLSRIGPTGISMSHVNTQVKGSIGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRQPLVHWEEKQRISVVKWAKHCYEKGCLCEIVDPSLKGHIAAHCLHQFGDIALSCLQEDGAERPSMKDVIGMLELVLQLQNSGVGEEVSSRDECSQHGGDYSKSTDGDNSSWRSKESSVLIPGDVFSEIKDPKGR* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0310 838 MobiDBLite consensus disorder prediction 790 820 - -
Pvu8g0310 838 ProSiteProfiles Protein kinase domain profile. 504 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0310 838 Gene3D - 227 410 - -
Pvu8g0310 838 Gene3D - 34 192 - -
Pvu8g0310 838 ProSitePatterns Protein kinases ATP-binding region signature. 510 533 IPR017441 GO:0005524
Pvu8g0310 838 CDD STKc_IRAK 519 777 - -
Pvu8g0310 838 SUPERFAMILY Protein kinase-like (PK-like) 481 778 IPR011009 -
Pvu8g0310 838 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 27 802 - -
Pvu8g0310 838 MobiDBLite consensus disorder prediction 803 820 - -
Pvu8g0310 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pvu8g0310 838 Gene3D Phosphorylase Kinase; domain 1 489 580 - -
Pvu8g0310 838 Pfam Protein tyrosine and serine/threonine kinase 510 774 IPR001245 GO:0004672|GO:0006468
Pvu8g0310 838 Gene3D Transferase(Phosphotransferase) domain 1 581 799 - -
Pvu8g0310 838 PANTHER OS07G0166700 PROTEIN 27 802 IPR045272 GO:0004714|GO:0006468
Pvu8g0310 838 SMART serkin_6 504 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0310 838 Pfam Malectin-like domain 37 409 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0310 Pvu-Chr8 2493400 2495916 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0310 20 838 Receptor kinase-like Gene Family AT3G51550 44.693 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0310 Malectin_like 3.5e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0310 - - vun:114186088 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0310 8 2493400 2495916 Pvu4g0433 4 4481814 4484303 PCT