Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0308 ATGGACACAACATGCATGGCGACCATCCTCTTCCTCCTCTTGTTGTGCCACCCTTACCTTTCCACAGCAGACGTTATTTACCGTCCCGTTGAGCATTTCACCGTAAACTGTGGCTCCGACATAAACTTCAGTGTCGATGGTCGGAACTGGACTGGAGATAGCAATACCAAATTCCTCTCCGAAAGCAAGGACTCAGTTGCTGCTCCTGCACAGATACAATCAACAACACAGGGCCCTTACACTTATGCTCGCCTCTCTTATTCCCAATTCACCTACTCCTTCCCCGTCACCACACAAGGCCCCTTCTTCCTTCGTCTCTTCTTCTACTCAACTTCATACCAAATGTTTGACCGCTCCAAAGCCTATTTCTCAGTCCAAGCAGGCCCATACACCCTCCTTCAACATTTCAATGCTTCCCTCTATGCTGATACTGACGACGACCCTGGCCACCACGACACCTTGTTCAGAGAGTATTGCATCTACCTCCAACATGGTGAGAGCCTCAACATAACCTTCACTCCAACCACCACGGATTCGTACGCTTTCATTAATGGAATCGAGATTGTTTCAATGCCCTCTTATCTCTACTACTCCAACCCTAACTACACCGTTCTTGACGACTTCATTGGATTGCCACAACTTGTTGGTCAAATGAACCAAGTATATATCATTACAAACAACGTTTCTCTGGAGACGAAGCACCGGTTGAATGTTGGAGGAGCACAAATCTCCCCTTCGCAGGACACTGGCATGCTCAGGGCCTGGGATACGGATGATAAATACCTAATTACTGACAGTGGAACATCTGTTGATTTTATCAAGAAAACTAATCTCAGCTTCGTTAAGACTCCTAACTACACGGCACCCGACCAAGTATACCGAACCGTAAGGAATATTGGATTGAATCCCTTTAAGAACCTGACATGGCAGTTTCCGGTTTATTCTGGCTTCTTCTACTTGCTAAGGTTACACTTTTGTCAGCTCAACCCGGAGGTTCAAGACCCTGGAAACCAAATATTCTACATCTTCATTCAGAAACTGATGGCTGAAGGAGGTGCAGACATTCTCATGTGGAGCGACAACCAGAAGGGTGTACCAGTGGTTAAAGACTACGCAGTTTACATTCCAGGGAATAGGGAAAAGGTATATCTTTCACTGGAAATGCATCCTCATCCTAAAAGCTTCATCCAGGATGCACAACTTAATGCAATTGAACTCTTCAAAATCAACGACACAACAGGTAGTCTCGCTGAACCCAACCCAGATCCTCTTCCAAAAACCCTCGATAAGCAAATACCAGAGCAGAAAAGTAGCGGCACCACCAGACCCCTAATTGCAGCCATCGCAGGTGCAGTTTTTGGTGTCGTTTTACTCTCCTTTATAGTCGTTTTTTTCATCACCAAATGCAAGCAGAACGTTGTTGTTTACAAAAACCAAAAAGATGGAACTTCTCGCGGGGGAGGCTCATCATCATCGCTGCCAACCAACCTCTGCCGTCATTTCTCAATCGCAGAAATCAGGGCCGCGACAAATAACTTCGACAAACTCTTCGTCATTGGAGCGGGAGGCTTCGGCGACGTGTACAAAGGCTACATCGACGACGGCTCAACACCTGTCGCTATCAAAAGGCTCAAACCGGGTTCTCAGCAAGGTCTGAACGAGTTCATGAACGAGATCGAAATGCTCTCTAAACTTCGTCATGTCCATCTTGTTTCCCTCATCGGTTACTGCTACGAGAGCAACGAGATGATACTCGTTTACGACTTAATGGATCGTGGAACCCTCCGTGATCATCTCTACGGAACCGATAACCCTCCGCTCTCGTGGAATCAAAGGCTTCAGATATGCATCGGCGCCGCACGAGGACTGCATTATCTGCATACAGGTGCGAAACAAATGATCATTCACCGTGACGTGAAGAGCACTAACATCTTGTTGGATGAAAAATGGGTGGCGAAGGTTTCAGACTTCGGGTTATCTCGAATTGGGCCCATGGGTTCTTTGATGACCCATGTGAGCACTCAGGTGAAAGGCAGTATTGGGTATTTGGATCCGGAGTATTACAAACGACAGCGTTTGACGGAGAAGTCGGACGTTTACTCGTATGGGGTGGTGCTGTTGGAGGTATTGTGTGGGAGGCAGCCTTTGCTCCGAATGGTAGAGAAGCCACAGGTGTCACTTGTGGATTGGGCGAAGCATTGGTATGAGAAGGGGTCTCTGGGTGACATTGTGGATCCAGCATTGAAGGGGCAGATAGCACCTCACTGTTTGCGCAAATTTGGTGAGGTTGCGTTGAGCTGTTTGCTTGAGGATGGGACTCAGCGACCTTCCATGAACGACGTGGTTGGGGTGTTAGAGTTTGTTCTGCGACTTCAGCTTCAGAATAGTGCTAATGTGAATGCAGTGTTGGAAAGTGGTGGGGATTATGAAGACAGTTCTACTGAGGACATGTTTAGCAGCACCCATACTAGTGTTCATGCTTCAGACTATAGTAACAGCAGTGGATTCAACAGTACAACCTACGGGAGTAAGGCATCTGACAGGTTGATCTCAGAGCTTGTTTTTTCTGAGATTAAGGATCCAAAGGGACGCTGA 2595 0.4717 MDTTCMATILFLLLLCHPYLSTADVIYRPVEHFTVNCGSDINFSVDGRNWTGDSNTKFLSESKDSVAAPAQIQSTTQGPYTYARLSYSQFTYSFPVTTQGPFFLRLFFYSTSYQMFDRSKAYFSVQAGPYTLLQHFNASLYADTDDDPGHHDTLFREYCIYLQHGESLNITFTPTTTDSYAFINGIEIVSMPSYLYYSNPNYTVLDDFIGLPQLVGQMNQVYIITNNVSLETKHRLNVGGAQISPSQDTGMLRAWDTDDKYLITDSGTSVDFIKKTNLSFVKTPNYTAPDQVYRTVRNIGLNPFKNLTWQFPVYSGFFYLLRLHFCQLNPEVQDPGNQIFYIFIQKLMAEGGADILMWSDNQKGVPVVKDYAVYIPGNREKVYLSLEMHPHPKSFIQDAQLNAIELFKINDTTGSLAEPNPDPLPKTLDKQIPEQKSSGTTRPLIAAIAGAVFGVVLLSFIVVFFITKCKQNVVVYKNQKDGTSRGGGSSSSLPTNLCRHFSIAEIRAATNNFDKLFVIGAGGFGDVYKGYIDDGSTPVAIKRLKPGSQQGLNEFMNEIEMLSKLRHVHLVSLIGYCYESNEMILVYDLMDRGTLRDHLYGTDNPPLSWNQRLQICIGAARGLHYLHTGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPMGSLMTHVSTQVKGSIGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMVEKPQVSLVDWAKHWYEKGSLGDIVDPALKGQIAPHCLRKFGEVALSCLLEDGTQRPSMNDVVGVLEFVLRLQLQNSANVNAVLESGGDYEDSSTEDMFSSTHTSVHASDYSNSSGFNSTTYGSKASDRLISELVFSEIKDPKGR* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0308 864 PANTHER OS07G0166700 PROTEIN 25 835 IPR045272 GO:0004714|GO:0006468
Pvu8g0308 864 Pfam Protein tyrosine and serine/threonine kinase 518 783 IPR001245 GO:0004672|GO:0006468
Pvu8g0308 864 Pfam Malectin-like domain 35 409 IPR024788 -
Pvu8g0308 864 Gene3D Transferase(Phosphotransferase) domain 1 590 805 - -
Pvu8g0308 864 Gene3D Phosphorylase Kinase; domain 1 498 589 - -
Pvu8g0308 864 SUPERFAMILY Protein kinase-like (PK-like) 488 788 IPR011009 -
Pvu8g0308 864 ProSiteProfiles Protein kinase domain profile. 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0308 864 MobiDBLite consensus disorder prediction 414 436 - -
Pvu8g0308 864 Gene3D - 32 192 - -
Pvu8g0308 864 Gene3D - 229 410 - -
Pvu8g0308 864 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Pvu8g0308 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pvu8g0308 864 SMART serkin_6 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0308 864 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 25 835 - -
Pvu8g0308 864 CDD STKc_IRAK 519 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0308 Pvu-Chr8 2486348 2488942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0308 20 864 Receptor kinase-like Gene Family AT3G51550 45.880 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0308 Malectin_like 1.6e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0308 - - vun:114186088 1189.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0434 4 4492159 4494985 Pvu8g0308 8 2486348 2488942 PCT