Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0307 ATGTTTCTCAAATATTGGGGCTTCTGCCATTCTAAGCGCACAAGTTCATGTCAGTATACAACAAGAATAGAAGAGCTGTGTCATCACTTCTCTCTTGCCGATATTAGGAAATCAACCAACAACTTTGATCGTAAGAGGTTCATTGACCTTGACGGATTTGGTACCAATGTATATAAAGGTTGTCTTCAGCATGATGATTCTGATTATACAGTCATTATAAAGCGATGTAATAAGGATGCCATTGGAAGAAGAGAGCGTGAATGGGACCTGCTTAAGAATGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCTAATATTATCTCTCTTATTGGATTCTGCAACCACAAGAAAGAGAAGATTGTTGTGTACGAGTACACGTCCAATGGATCTCTGTGTAGTCACCTGCAACGTGGGGAACTGTCATGGAAGAAGAGGCTAGAGATATGCATAGGAGTAGCAAGGGGATTGCACTACCTTCATGCTGGAGCAAAGCGCACCATCGTTCACCGTAATATTCACCCTCGCAACATCCTTTTGGATGCAAACATGGAGCCAAAGCTTTCAGAGTTTAACCTTAGCTTACAGGGACAACGTTTTATGTCAAAGCCAAAGCCAATTATAGTAGACACTGTTCCTGGTGTTTTAGGATACATGGCTCCGGAGTATATCATAAACGGTATCGTCACAGATAAAACCGATGTTTTCTCATTTGGTACGGTTCTATTAGAAGTTGTGTGTGGAAGAACGTATTCTGACATGATAGAGGAATTTCTGGAGAAGCCTGTTGAGGAGAATATTGATTTGGAGATCAAAGGAAAGATTGTGCCAGAGTGTTGGAAAGTGTTTATAGATATCATGCAAAGATGTGTGGATTATGAAGCAGAAGAGCGACCAACAATGGGTGAAGTAGAGGTGCAACTTGAGTATGCTCTGTCCTTGCAAGAACAAGCAGATATCACAAACATCCATCATCATTATATCTTATTGTCAAAAACCAGTACTAACCTACTTCTTAACATAAAAGAGCAATAA 1032 0.405 MFLKYWGFCHSKRTSSCQYTTRIEELCHHFSLADIRKSTNNFDRKRFIDLDGFGTNVYKGCLQHDDSDYTVIIKRCNKDAIGRREREWDLLKNEIELLCQLRHPNIISLIGFCNHKKEKIVVYEYTSNGSLCSHLQRGELSWKKRLEICIGVARGLHYLHAGAKRTIVHRNIHPRNILLDANMEPKLSEFNLSLQGQRFMSKPKPIIVDTVPGVLGYMAPEYIINGIVTDKTDVFSFGTVLLEVVCGRTYSDMIEEFLEKPVEENIDLEIKGKIVPECWKVFIDIMQRCVDYEAEERPTMGEVEVQLEYALSLQEQADITNIHHHYILLSKTSTNLLLNIKEQ* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0307 343 SUPERFAMILY Protein kinase-like (PK-like) 16 307 IPR011009 -
Pvu8g0307 343 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 330 - -
Pvu8g0307 343 Pfam Protein tyrosine and serine/threonine kinase 53 306 IPR001245 GO:0004672|GO:0006468
Pvu8g0307 343 Gene3D Phosphorylase Kinase; domain 1 6 125 - -
Pvu8g0307 343 ProSiteProfiles Protein kinase domain profile. 42 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0307 343 PANTHER OS07G0166700 PROTEIN 17 330 IPR045272 GO:0004714|GO:0006468
Pvu8g0307 343 Gene3D Transferase(Phosphotransferase) domain 1 126 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0307 Pvu-Chr8 2480964 2482269 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0307 3 318 Receptor kinase-like Gene Family AT3G51550 39.763 4.66e-68 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0307 PK_Tyr_Ser-Thr 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0307 - - pvu:PHAVU_008G029700g 572.007