Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0305 ATGTTTCTCAAATATTGTGGCTTCTGCCATTCTAAGCGCACAAGTTCATGTCAGTATACAACAAGAATAGAAGACCTGTGCCATCACTTCTCTCTTGCCGATATTAGGAAATTAACCAACAACTTTGATCATACGAGGATCATTGACGACGTATTTGGTATCCGAGAATATAAAGGTTGTCTTCAGCATGATGGTTCTGATTATACAGTCACTATAAAGCGATTTAATGACGATGTGGATAAAAGAGAGAAGAAATGGAACAAGTTTAAGAATGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCTAATATTATCTCTCTTACTGGATTCTGCAACCACGAGAAAGAGAAGATTGTTGTGTGCGAGTACATGCCCAATGGATCTCTACATAGTCACCTACGACGTGGGGAACTGTCATGGAAGAAGAGGCTAGAGATATGCATAGGAGCAGCAAGGGGATTGCACTACCTTCATGCTGGAGCAAAGCGCACCATCATTCATCGTGCTATCAAACCTCGCAACATTCTTTTGGATGCAAACATGGAGCCAAAGCTTTCAAATTTTGGCCATAGCTTACAGGGACAACGTTTTATGTCAAAGCCAAAGCCAATTATAGTACATACTATTCCTGGTAATGTTTTATTTTATGACATTACTTGA 660 0.4015 MFLKYCGFCHSKRTSSCQYTTRIEDLCHHFSLADIRKLTNNFDHTRIIDDVFGIREYKGCLQHDGSDYTVTIKRFNDDVDKREKKWNKFKNEIELLCQLRHPNIISLTGFCNHEKEKIVVCEYMPNGSLHSHLRRGELSWKKRLEICIGAARGLHYLHAGAKRTIIHRAIKPRNILLDANMEPKLSNFGHSLQGQRFMSKPKPIIVHTIPGNVLFYDIT* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0305 219 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 213 - -
Pvu8g0305 219 SUPERFAMILY Protein kinase-like (PK-like) 18 198 IPR011009 -
Pvu8g0305 219 ProSiteProfiles Protein kinase domain profile. 46 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0305 219 Gene3D Transferase(Phosphotransferase) domain 1 124 210 - -
Pvu8g0305 219 Gene3D Phosphorylase Kinase; domain 1 5 123 - -
Pvu8g0305 219 Pfam Protein tyrosine and serine/threonine kinase 58 191 IPR001245 GO:0004672|GO:0006468
Pvu8g0305 219 PANTHER OS07G0166700 PROTEIN 17 213 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0305 Pvu-Chr8 2456766 2457454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0305 11 208 Receptor kinase-like Gene Family AT3G51550 43.350 5.32e-45 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu8g0305 PK_Tyr_Ser-Thr 1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0305 - - pvu:PHAVU_008G029700g 383.645