Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0304 ATGGATCGCGGAACCCTCCGTGATCATCTCTACGGAACCGATAACCCTCCGCTCTCGTGGAATCAAAGGCTTCAAATATGCATCGGCGCCGCACGAGGACTGCATTATCTGCATACAGGTGCGAAACAAATGATCATTCACCGTGACGTGAAGAGCACTAACATCTTGTTGGATGAAAAATGGGTGGCGAAGGTTTCAGACTTCGGGTTATCTCGAATTGGGCCCATGGGTTCTTTGATGACCCATGTGAGCACTCAGGTGAAAGGCAGTATTGGGTATTTGGATCCGGAGTATTACAAACGACAGCGTTTGACGGAGAAGTCGGACGTTTACTCGTATGGGGTGGTGCTGTTGGAGGTATTGTGTGGGAGGCAGCCTTTGCTCCGAATGGTAGAGAAGCCACAGGTGTCACTTGTGGATTGGGCGAAGCATTGGTATGAGAAGGGGTCTCTGGGTGACATTGTGGATCCAGCATTGAAGGGGCAGATAGCACCTCACTGTTTGCGCAAATTTGGTGAGGTTGCGTTGAGCTGTTTGCTTGAGGATGGGACTCAGCGACCTTCCATGAACGACGTGGTTGGGGTGTTAGAGTTTGTTCTGCGACTTCAGCTTCAGAATAGTGCTAATGTGAATGCAGTGTTGGAAAGTGGTGGGGATTATGAAGACAGTTCTACTGAGGACATGTTTAGCAGCACCCATACTAGTGTTCATGCTTCAGACTATAGTAACAGCAGTGGATTCAACAGTACAACCTACGGGAGTAAGGCATCTGACAGGTTGATCTCAGAGCTTGTTTTTTCTGAGATTAAGGATCCAAAGGGACGCTGA 828 0.4879 MDRGTLRDHLYGTDNPPLSWNQRLQICIGAARGLHYLHTGAKQMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPMGSLMTHVSTQVKGSIGYLDPEYYKRQRLTEKSDVYSYGVVLLEVLCGRQPLLRMVEKPQVSLVDWAKHWYEKGSLGDIVDPALKGQIAPHCLRKFGEVALSCLLEDGTQRPSMNDVVGVLEFVLRLQLQNSANVNAVLESGGDYEDSSTEDMFSSTHTSVHASDYSNSSGFNSTTYGSKASDRLISELVFSEIKDPKGR* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0304 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 45 57 IPR008271 GO:0004672|GO:0006468
Pvu8g0304 275 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0304 275 PANTHER OS07G0166700 PROTEIN 1 246 IPR045272 GO:0004714|GO:0006468
Pvu8g0304 275 Gene3D Transferase(Phosphotransferase) domain 1 1 217 - -
Pvu8g0304 275 Pfam Protein tyrosine and serine/threonine kinase 1 194 IPR001245 GO:0004672|GO:0006468
Pvu8g0304 275 SUPERFAMILY Protein kinase-like (PK-like) 1 199 IPR011009 -
Pvu8g0304 275 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 1 246 - -
Pvu8g0304 275 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0304 Pvu-Chr8 2444726 2446098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0304 1 275 Receptor kinase-like Gene Family AT3G51550 55.363 2.22e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0304 PK_Tyr_Ser-Thr 1.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0304 - - vun:114186088 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0304 8 2444726 2446098 Pvu8g0304 8 2444726 2446098 ECH