Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0302 ATGTTTCTCAAATATTGGGGCTTCTGCCATTCGAAGCGCACAAGTTCATGTCAGTATAAAACAAGAATAGAAGAGCTGTGCCATCAGTTCTCTCTTGCCGATATTAGTAAATCAACCAACAACTTTGATCAGAATAGGCTCATTAACTTTGAAGGATTTGGTATCGAAGTATATAAAGGCTGTCTTCAGCATGATGGTTCTGATTATGCAGTCACTATAAAGCGATTTAATGACGATGTGGATGAAAGAGGGGAGCAATGGAACGTGTTTAAGAATGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCTAATATTATCTCTCTTACTGGATTCTGCAACCACAAGAAAGAGAAGATTGTTGTGTTGGAGTACATGCCCAATGGATCTCTGTATGATCACCTACAACGTGGGGAACTGTCATGGAAGAAGAGGCTAGAGATATGCATAGGAGCAGCAAGGGGATTGCACTACCTTCATGCTGGAGCAAAGCGCACCATCATTCATCGTGATATCAAACCTCAGAACATTCTTTTGGATGCAAACATGGAGCCAAAGCTTTCAAATTTTGGGCTTAGCTTACAGGGACAACGTTTTATGTCAAAGCCAAAGCCAATTAAAGTAGATACTATTGCTGGTACTTTTGGCTACTTGGCTCGGGAGTGTTTCATGAACAGTATCGTCTCAGATAAAACCGATGTTTACTCATTTGGTATTGTTCTATTACTAGTTGCGTCTGGAAGAGCGTATTCTGACATGATAAAGGAATTTCTGGAGAAGCCTCTTGAGGAGAATATTGATTTGGAGATCAAAGGAAAGATTGTGCCAGAGTGTTGGAAAGTGTTTATAGATATCATGCAAAGATGTGTGGATTCTGAAGCAGAAGAACGACCAACAATGGGTGAAGTGGAGGTGCAACTTCAGTATGCTCTGTCGTTGCAAGAACAAGCAGATATCACAAACATCCATCATCATTATATCTTATTGTCAAAAACCATTATTAACCCAACATCTTAA 1014 0.4014 MFLKYWGFCHSKRTSSCQYKTRIEELCHQFSLADISKSTNNFDQNRLINFEGFGIEVYKGCLQHDGSDYAVTIKRFNDDVDERGEQWNVFKNEIELLCQLRHPNIISLTGFCNHKKEKIVVLEYMPNGSLYDHLQRGELSWKKRLEICIGAARGLHYLHAGAKRTIIHRDIKPQNILLDANMEPKLSNFGLSLQGQRFMSKPKPIKVDTIAGTFGYLARECFMNSIVSDKTDVYSFGIVLLLVASGRAYSDMIKEFLEKPLEENIDLEIKGKIVPECWKVFIDIMQRCVDSEAEERPTMGEVEVQLQYALSLQEQADITNIHHHYILLSKTIINPTS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0302 337 Gene3D Transferase(Phosphotransferase) domain 1 125 329 - -
Pvu8g0302 337 Gene3D Phosphorylase Kinase; domain 1 6 124 - -
Pvu8g0302 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pvu8g0302 337 Pfam Protein tyrosine and serine/threonine kinase 56 305 IPR001245 GO:0004672|GO:0006468
Pvu8g0302 337 SMART serkin_6 42 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0302 337 PANTHER OS07G0166700 PROTEIN 17 329 IPR045272 GO:0004714|GO:0006468
Pvu8g0302 337 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 329 - -
Pvu8g0302 337 SUPERFAMILY Protein kinase-like (PK-like) 17 306 IPR011009 -
Pvu8g0302 337 ProSiteProfiles Protein kinase domain profile. 42 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0302 Pvu-Chr8 2436788 2438053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0302 3 317 Receptor kinase-like Gene Family AT3G51550 42.136 9.80e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0302 PK_Tyr_Ser-Thr 9.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0302 - - pvu:PHAVU_008G029700g 558.91