Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0301 ATGTTTCCAAAATGTTTGGGTTTCTGCGGTTGGAAGCACACTAGTTCATCTCAGAAACAGCATCCAACGCTAATACATGAGTTGTGCCAGCAATTTTCTCTCACCGATCTTAAGAAATCGACAAACAACTTTCATCATACCAGACTAATTGGATACTCAAGCTTTGGTAAACTATACAAAGGTTGCCTCCAACACGACGATGGTTCTGAATATTCAGTTACAATAAAGCCATTATATGGAGAAGATAACATCGAAGGAAACAACCAGTTTAACAAAGAAGTAGAGTTGCTCTGTCAGCTTCATCACCCTAATTGTGTCTCTCTTATAGGATTCTGCAATCACAAAAAAGAGAAAATTCTTGTGTACGAGTACATGTCCAATGGATCTCTAGATCAATACATACAAGGTAAGTTTAGAGAAGCACTGTCATGGAGGAAAAGGATAGAGATATGCATAGGAGTTGCTCGTGGACTGCACTACCTTCATGCTGGAGCCAAACGCACCATCTTTCACCGTGACGTTTGTCTCTCAAACATTCTTCTGGACGACCAAATGGAGCCAAAACTAGCAGGTTTCGGCCGTAGCATACAGGGAGCACGCTTTATGTCAAAGCCAAAAACAATTCCAATAGATGATGATACTTGGGGTAGTTATGGCTACCATCCTATGCAGCACTTCAGAGACACTATCGTCACAGATAAATGTGATGTTTTTACATTTGGTATGCTTCTTCTTGAAATAGTCTGGGGAAGAAGGTATTTTGCCATGAAGGAAATAGATGGATTTCTGGAGAAGCCTGTTGAGGAGAATATTGATATGGATATAAAAGGAAAGATTGCGCCAGAGTGTTGGAAAGTGTTTATAGATATCATCCAAAGATGTGTGAATTCTGCAGCAGATGAGCGACCAACAATGGGTGAGGTAGAGCTGCAACTTGAGTATGCTCTGTCGTTGCAGGAACAAGCAGATAGCACAAACATCCATGGTGATTATATCTTATTGTCTAAAACCATTGTTAACCTAAAGCCTTAG 1032 0.4041 MFPKCLGFCGWKHTSSSQKQHPTLIHELCQQFSLTDLKKSTNNFHHTRLIGYSSFGKLYKGCLQHDDGSEYSVTIKPLYGEDNIEGNNQFNKEVELLCQLHHPNCVSLIGFCNHKKEKILVYEYMSNGSLDQYIQGKFREALSWRKRIEICIGVARGLHYLHAGAKRTIFHRDVCLSNILLDDQMEPKLAGFGRSIQGARFMSKPKTIPIDDDTWGSYGYHPMQHFRDTIVTDKCDVFTFGMLLLEIVWGRRYFAMKEIDGFLEKPVEENIDMDIKGKIAPECWKVFIDIIQRCVNSAADERPTMGEVELQLEYALSLQEQADSTNIHGDYILLSKTIVNLKP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0301 343 Pfam Protein tyrosine and serine/threonine kinase 47 310 IPR001245 GO:0004672|GO:0006468
Pvu8g0301 343 ProSitePatterns Tyrosine protein kinases specific active-site signature. 169 181 IPR008266 GO:0004672|GO:0006468
Pvu8g0301 343 Gene3D Phosphorylase Kinase; domain 1 8 124 - -
Pvu8g0301 343 Gene3D Transferase(Phosphotransferase) domain 1 125 335 - -
Pvu8g0301 343 PANTHER OS07G0166700 PROTEIN 14 335 IPR045272 GO:0004714|GO:0006468
Pvu8g0301 343 SUPERFAMILY Protein kinase-like (PK-like) 19 316 IPR011009 -
Pvu8g0301 343 ProSiteProfiles Protein kinase domain profile. 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0301 343 PANTHER TYROSINE KINASE FAMILY PROTEIN 14 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0301 Pvu-Chr8 2432573 2434137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0301 6 323 Receptor kinase-like Gene Family AT3G51550 38.081 1.03e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0301 PK_Tyr_Ser-Thr 9.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0301 - - gmx:100305395 422.55