Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0299 ATGGCCCAGTCCTTCGGTCAGACCGAGATAAACTGGGACAAGCTAGATAAAACTAGGTTCTATGTCGTAGGAGCTGGACTCTTTACAGGTGTTTCGGTGGCACTTTACCCCATTTCGGTTGTGAAAACTAGGCTGCAGGTTGCCACAAAGGATGCTGTAGAGAGAAATGTGTTATCTGTTATGAAAGGAATACTTAAAACAGATGGCGTCCCTGGTCTGTATAGAGGGTTTGGCACAGTTATCACTGGTGCTATTCCTGCCCGAATAATATTCCTCTCCACTCTAGAGACCACAAAGGTGGCTGCTTTCAGAATGCTTGAACCGTTTAAACTATCTGAAACTACCCAAGCTGCCATTGCAAATGGAGTTGCAGGCATGACATCATCGATTTTTGCTCAATCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGCCATGCCCAATATAGCGGGGGTTTGGATGTTGCTCGCAAGGTTTTAAGATCTGATGGCATCCGGGGATTGTATAGAGGGTTTGGTCTGTCTGTTATTACTTATTCACCTGCTAGTGCAGTATGGTGGGCAAGCTATGGTTCAAGCCAACGCTACATTTGGAGATTCTTGGGCCATGATACCAAATATGATGAACACATTCCTAGTATGCAGAAAATAATGTTAGTTCAGGCTTTGGGAGGGATTATTGCTGGTGCATCTTCATCCTGCATTACAACCCCATTGGATACTATCAAGACACGATTACAGGTAATGGGTCATGAAAATAAAAGCTCTATAAAACAAGTTGCTAAGGATTTAATGAATGAAGATGGTTGGAAAGGCTTTTATAGAGGGTTTGGCCCAAGATTCTTTAGCATGTCAGCATGGGGCACTTCGATGATATTGACTTATGAGTATCTGAAACGTGTATGCGCAAAAGATGAATAG 945 0.4307 MAQSFGQTEINWDKLDKTRFYVVGAGLFTGVSVALYPISVVKTRLQVATKDAVERNVLSVMKGILKTDGVPGLYRGFGTVITGAIPARIIFLSTLETTKVAAFRMLEPFKLSETTQAAIANGVAGMTSSIFAQSVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVITYSPASAVWWASYGSSQRYIWRFLGHDTKYDEHIPSMQKIMLVQALGGIIAGASSSCITTPLDTIKTRLQVMGHENKSSIKQVAKDLMNEDGWKGFYRGFGPRFFSMSAWGTSMILTYEYLKRVCAKDE* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0299 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Pvu8g0299 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Pvu8g0299 314 Pfam Mitochondrial carrier protein 27 100 IPR018108 -
Pvu8g0299 314 Pfam Mitochondrial carrier protein 119 205 IPR018108 -
Pvu8g0299 314 Pfam Mitochondrial carrier protein 227 313 IPR018108 -
Pvu8g0299 314 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 314 - -
Pvu8g0299 314 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Pvu8g0299 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
Pvu8g0299 314 Gene3D Mitochondrial carrier domain 21 314 IPR023395 -
Pvu8g0299 314 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Pvu8g0299 314 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Pvu8g0299 314 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Pvu8g0299 314 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0299 Pvu-Chr8 2422343 2427346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0299 10 314 Chloroplast and Mitochondria Gene Families AT5G15640 74.919 5.45e-172 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0299 K15121 - gmx:100781796 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0299 8 2422343 2427346 Pvu8g0299 8 2422343 2427346 ECH
Pvu4g0446 4 4615284 4621396 Pvu8g0299 8 2422343 2427346 PCT