Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0298 ATGGGATTCTCTCTGTTACCAAAACCAACTCCTTGCATTTTGTTCTTGGTTCTGCTTTCTTCTACTTGCTTCACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATCACAATCAAATGGGATGTTTTATCCTGGACCCCTGATGGATATGTAGCTGTTGTTACAATGAACAACTTCCAAAGATATCGTCACATTACATCACCTGGCTGGTCACTAGGATGGACATGGGCAAAAAGGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGAGACTGCTCAAAATTTAAGGGAAATATTCCACATTCTTGTAAGAAAAATCCAACAGTGGTAGATTTGCTTCCTGGGACACCTTACAATCAACAAATTGCAAATTGTTGCAAAGGTGGGGTGCTCAGTTCATGGGTGCAGGATCCAAGCAGAGCAGCTGCATCTTTTCAAGTCAGTGTTGGTGATGCTGGAAACTCAAAGAGAACTGTCAAACTCCCAACAAACTTCACCTTGAAAACACCTGGACCAGGTTATACTTGTGGAAAAGCTAGGATTGTCAGACCCACTAAGTTCATTACTCCAGACAAAAGGAGAACGACCCAAGCACTGATGACATGGCAGGTGGTATGCACATATTCACTATTTCTAGCTCATAAAACTCCCACTTGCTGCCTCTCGCTTTCATCTTTCCATAATAATACTATTGTGCCTTGCCCAACATGTTCATGTGGCTGCCAACGTAATTCATCTCAGTCAGGGAAATGTGTAAATCCAGGTACACCACATTTGGCCTCATTTGTTTCTGGCTTTGGGGAGAACAATCTTTCACCTATGGTTCAATGTTCTAATCACATGTGTCCAATCCGAGTCCACTGGCATGTTAAGTTCAGCTCCGAGAAGTACTGGCATGTGAAGGTTATGATTACTAATTTTAATTACAGGATGAAATATTCTGACTGGAACTTGGCTATTCAACATCCGAACTTTGACCATCGGACTCAAGTGTCCGGTTTCAACTACAAGCTAATAACTCCTTATGCTTCAATAAATGATACAGCAGAGTTGTGGGGAATGAAGTCCCAGCATAATGATGTTCTCAATCTAGCTGGCCCGAATGGCAAGGTTCAAGGAGATATACTCTTCCGAAAGGATAAAGCAACTTTAAGTTTTGATAAGGGTTGGGCTTTCCCTCGATGGATCTACTTCAATGGTGACATGTGTGTGATGCCACCACCCAGTGCTTATCCCTTTTAG 1263 0.4268 MGFSLLPKPTPCILFLVLLSSTCFTSTDAYDPLDPNGNITIKWDVLSWTPDGYVAVVTMNNFQRYRHITSPGWSLGWTWAKREVIWSMMGGQTTEQGDCSKFKGNIPHSCKKNPTVVDLLPGTPYNQQIANCCKGGVLSSWVQDPSRAAASFQVSVGDAGNSKRTVKLPTNFTLKTPGPGYTCGKARIVRPTKFITPDKRRTTQALMTWQVVCTYSLFLAHKTPTCCLSLSSFHNNTIVPCPTCSCGCQRNSSQSGKCVNPGTPHLASFVSGFGENNLSPMVQCSNHMCPIRVHWHVKFSSEKYWHVKVMITNFNYRMKYSDWNLAIQHPNFDHRTQVSGFNYKLITPYASINDTAELWGMKSQHNDVLNLAGPNGKVQGDILFRKDKATLSFDKGWAFPRWIYFNGDMCVMPPPSAYPF* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0298 420 PANTHER COBRA-LIKE PROTEIN 7 420 - -
Pvu8g0298 420 PIRSF COBRA 3 420 IPR006918 GO:0010215|GO:0031225
Pvu8g0298 420 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Pvu8g0298 420 PANTHER PROTEIN COBRA 7 420 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0298 Pvu-Chr8 2417240 2420760 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0298 13 420 COBRA Gene Family AT3G02210 66.748 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0298 - - gmx:112997606 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0298 8 2417240 2420760 Pvu8g0298 8 2417240 2420760 ECH
Pvu4g0447 4 4631902 4636405 Pvu8g0298 8 2417240 2420760 PCT