Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0292 ATGGGTAGGGAGTTAGCTAGACTTCAAGATTTTAGATTGTTAAAATTCCAGTGGCTAGATAGCCATCAAGTTTTTGTGACAAGTGAGAACTACTTAAGCAAGAAGGTGTCACAAATTGGAACTATGTTTCTGAATTGTGTGGGCATGTGTTGTTCGAAGCCCACAACAAATACAACTTCATCTCAGAGACAGTTTCCAACGTTGATAGAAGAGCTGTGCCATCAATTTTCTCTCACCGATCTTAGGAAAGCCACCAATAACTTTGATCAGAAGAGAGTAATAGGAAGTGGATTATTTAGTGAAGTATACAAAGGGTGTCTGCAGCATGATGGTGCTTCTGATTACACGGTCGCAATAAAGCGATTTGATTATCAAGGATGGGCAGCGTTCAACAAGGAAATCGAATTGCTATGCCAGCTTCGTCACCCTAGATGTGTTTCTCTTATAGGATTCAGCAACCACGAAAATGAGAAGATTCTTGTATACGAGTACATGTCCAATGGATCTCTAGATAAACACCTACAAGAAGGTCAACTATCATGGAAGAAGAGGCTAGAGATATGCATAGGAGTAGCACGTGGACTACACTACCTTCACACCGGAGCCAAGCGTTCCATCTTTCACTGTATCCTCGGTCCTGGTACCGTCCTTTTGGATGACCAGATGGAGCCAAAACTCGCTGGTTTCGGTGCTAGCGAGCAGGGATCACGTTTTATGTCAAAGCAGAAGCAAATCAATGTAGATCGTGTTTTGGGTTGTTGGGGCTACACGGCTACGGACTATCTCATGGATGGTATCATCACAGCTAAATGGGATGTTTTCTCATTTGGTTTCCTTCTACTAGAAGTTAGAATTGATCCGATTATCAAAGGGAAGATTGCACCAGATTGTTGGCAAGTGTTTGTAGATATGATGGTAACTTGCTTGAAGTATAAACCAGATGAGAGACCAACAATTGGTGAAGTGGAGGTGCAACTTGAGCATGCTCTATCCATGCAGGAACAAGCTGATATCACAAACTCCAACTCTGAGTATACTTTACTGTCCAAAACCATTATTTCCCTGGGAGTGAAGAAATGCATTTGGTGTAACCAAAATTATTTTTTACAGCTGATTTTTTCAATTTAA 1128 0.4131 MGRELARLQDFRLLKFQWLDSHQVFVTSENYLSKKVSQIGTMFLNCVGMCCSKPTTNTTSSQRQFPTLIEELCHQFSLTDLRKATNNFDQKRVIGSGLFSEVYKGCLQHDGASDYTVAIKRFDYQGWAAFNKEIELLCQLRHPRCVSLIGFSNHENEKILVYEYMSNGSLDKHLQEGQLSWKKRLEICIGVARGLHYLHTGAKRSIFHCILGPGTVLLDDQMEPKLAGFGASEQGSRFMSKQKQINVDRVLGCWGYTATDYLMDGIITAKWDVFSFGFLLLEVRIDPIIKGKIAPDCWQVFVDMMVTCLKYKPDERPTIGEVEVQLEHALSMQEQADITNSNSEYTLLSKTIISLGVKKCIWCNQNYFLQLIFSI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0292 375 PANTHER TYROSINE KINASE FAMILY PROTEIN 58 283 - -
Pvu8g0292 375 PANTHER TYROSINE KINASE FAMILY PROTEIN 284 349 - -
Pvu8g0292 375 Gene3D Phosphorylase Kinase; domain 1 49 164 - -
Pvu8g0292 375 SUPERFAMILY Protein kinase-like (PK-like) 64 326 IPR011009 -
Pvu8g0292 375 ProSiteProfiles Protein kinase domain profile. 88 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0292 375 Gene3D Transferase(Phosphotransferase) domain 1 165 353 - -
Pvu8g0292 375 Pfam Protein tyrosine and serine/threonine kinase 90 283 IPR001245 GO:0004672|GO:0006468
Pvu8g0292 375 ProSitePatterns Protein kinases ATP-binding region signature. 94 120 IPR017441 GO:0005524
Pvu8g0292 375 PANTHER OS07G0166700 PROTEIN 284 349 IPR045272 GO:0004714|GO:0006468
Pvu8g0292 375 PANTHER OS07G0166700 PROTEIN 58 283 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0292 Pvu-Chr8 2367181 2369491 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0292 56 337 Receptor kinase-like Gene Family AT3G51550 38.820 8.17e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu8g0292 PK_Tyr_Ser-Thr 1.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0292 - - pvu:PHAVU_008G028600g 773.081