Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0291 ATGTTTCTGAATTGTTTGGGCATGTGTTGTTCGAAGCCCACAACAAATACAACTTCATCTCAGAGACAGTTTCCAACGTTGATAGAAGAGCTGTGCCATCAATTTTCTCTCACCGATCTTAGGAAAGCCACCAATAACTTTGATCAGAAGAGAGTAATAGGAAGTGGAATATTTAGTGAAGTATACAAAGGGTGTCTGCAGCATGATGGTGCTTCTGATTACCCGGTCGCAATAAAGCGATTTCATTATCAAGGATGGGAAGCGTTCAACAAGGAAATCGAATTGCTATGCCAGCTTCGTCACCCTAGATGTGTTTCTCTTATAGGATTCTGCAACCACCAAAATGAGAAGATTCTTGTATACGAGTACATGTCCAATGGATCTCTAGATAAACACCTACATGATGGTGAACTATCATGGAAGAAGAGGCTAGAGATCTGCATAGGAGTAGCACGTGGACTACACTACCTTCACACTGGTGCCAAGCGTTCCATCTTTCACTGTATCCTCGGTCCTAGTACCATCCTTTTGGATGACCACATGGAGCCAAAACTCGCTGGTTTCGGTGTTAGCGTGCAGGGATCACGTTTTATGTCAAAGCAGAAGCAAATCAATGTAGATCATATTTTGGGTACTTGGGGCTACCCGGCTACGGACTATATCATGGATGGTACCATCACAGCTAAATGGGATGTTTTCACATTTGGTTTCCTTCTACTAAAAGTTGTGTCCAGGGGGATGTTTTATTTAATAAGCCTGACTGAAAAAGAATGTCTGGAGAATCCTGTTGAGGAGAGAATTGATCCGATTATCAAAGGAAAGATTGCACCAGATTGTTGGCAATTGTTTGTAGATATGATGGTAACTTGCTTGAAGTATGAACCAGATGAGAGACCAACAATTGGTGAAGTGGAGGTGCAACTTGAGCATGCTCTATCAATGCAGGAACAAGCTGATATCACAAACTCCAACTCTGAGTATACCTTACTGTCCAAAACCATTATTTCCCTGGGAGTGAAACAATTTGATACTAAAGAAATGTAA 1044 0.4157 MFLNCLGMCCSKPTTNTTSSQRQFPTLIEELCHQFSLTDLRKATNNFDQKRVIGSGIFSEVYKGCLQHDGASDYPVAIKRFHYQGWEAFNKEIELLCQLRHPRCVSLIGFCNHQNEKILVYEYMSNGSLDKHLHDGELSWKKRLEICIGVARGLHYLHTGAKRSIFHCILGPSTILLDDHMEPKLAGFGVSVQGSRFMSKQKQINVDHILGTWGYPATDYIMDGTITAKWDVFTFGFLLLKVVSRGMFYLISLTEKECLENPVEERIDPIIKGKIAPDCWQLFVDMMVTCLKYEPDERPTIGEVEVQLEHALSMQEQADITNSNSEYTLLSKTIISLGVKQFDTKEM* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0291 347 ProSitePatterns Protein kinases ATP-binding region signature. 53 79 IPR017441 GO:0005524
Pvu8g0291 347 PANTHER OS07G0166700 PROTEIN 17 331 IPR045272 GO:0004714|GO:0006468
Pvu8g0291 347 Pfam Protein tyrosine and serine/threonine kinase 49 307 IPR001245 GO:0004672|GO:0006468
Pvu8g0291 347 Gene3D Transferase(Phosphotransferase) domain 1 124 335 - -
Pvu8g0291 347 ProSiteProfiles Protein kinase domain profile. 47 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0291 347 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 331 - -
Pvu8g0291 347 SUPERFAMILY Protein kinase-like (PK-like) 23 308 IPR011009 -
Pvu8g0291 347 Gene3D Phosphorylase Kinase; domain 1 8 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0291 Pvu-Chr8 2359858 2360982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0291 32 316 Receptor kinase-like Gene Family AT5G59700 40.864 7.56e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0291 PK_Tyr_Ser-Thr 3.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0291 - - pvu:PHAVU_008G028600g 600.127