Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0289 ATGTTTCTGAATTGTTTGGGCATGTGTTGTTCGAAGCTCACAACGAATACAAATTCATCTCAGAGACGGTTTCCAACGTTGATAGAAGAGCTGTGCCATCAATATTCTCTCACCGATATTAGGAAAGCCACCAATAACTTTGATCAGAAGAGAGTAATAGGAAATGGATTATTTAGTAAAGTATATAAAGGGTGTCTGCAGCATGATGGTGCTTCTGATTACACGGTCGCAATAAAGCGATTTGATAATCAAGGAAGGGAAGCGTTCAACAACGAAATAGAATTGCTATGCCAGCTTCGTCACCCTAGATGTGTTTCTCTCATAGGATTCTGCAACCACCAAAATGAGAAGATTCTTGTATACGAGTACATGTCCAATGGATCTCTAGATAAACACCTACAAGATGGTGAACTATCATGGAAGAAGAGGCTAGAGATATGCATAGGAGTAGCACGTGGACTACACTACCTTCACACTGGAGCCAAGCGTTCCATCTTTCACTGTATCCTCGGTCCTAGTACCATCCTTTTGGATGACCACATGGAGCCAAAACTCGCTGGTTTCGGTGTTAGCGTGCAGGGATCACGTTTTATGCCAAAGCAGAAGCAAATCAGTGTAGATCGTGTTTTGGGTACTTGGGGCTACACGACTACGGACTATGTCATGGATGGTACCATCACAGCTAAATGGGATGTTTTCTCATTTGGTTTCCTTCTACTAGAAGTTGTGTGCAGGGGGATGTTTTATTTAATAAGCCTTACTGAAAAAGAATGTCTCGAGAACCCTGTTGAGGAGGGACTTGACCCGATTATCAAAGGAAAGATTGCACCAGATTGTTGGCAAGTGTTTGTAGATATGATGGTAACTTGCTTGAATTATGAACCAGATGAGCGACCAACAATTGGTGAAGAGGAGGTGCAACTTGAGCATGCTCTATCCATGCAGGAACAAGCTGATATCACAAACTCCAACTCTGAGTATACCTTACTGTCCAAAACCATTATTTCCCTGGGAGTGAAACAATTTGATACTGAAAAAATTCTCTGA 1047 0.4193 MFLNCLGMCCSKLTTNTNSSQRRFPTLIEELCHQYSLTDIRKATNNFDQKRVIGNGLFSKVYKGCLQHDGASDYTVAIKRFDNQGREAFNNEIELLCQLRHPRCVSLIGFCNHQNEKILVYEYMSNGSLDKHLQDGELSWKKRLEICIGVARGLHYLHTGAKRSIFHCILGPSTILLDDHMEPKLAGFGVSVQGSRFMPKQKQISVDRVLGTWGYTTTDYVMDGTITAKWDVFSFGFLLLEVVCRGMFYLISLTEKECLENPVEEGLDPIIKGKIAPDCWQVFVDMMVTCLNYEPDERPTIGEEEVQLEHALSMQEQADITNSNSEYTLLSKTIISLGVKQFDTEKIL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0289 348 Gene3D Transferase(Phosphotransferase) domain 1 124 334 - -
Pvu8g0289 348 ProSitePatterns Protein kinases ATP-binding region signature. 53 79 IPR017441 GO:0005524
Pvu8g0289 348 PANTHER OS07G0166700 PROTEIN 17 331 IPR045272 GO:0004714|GO:0006468
Pvu8g0289 348 Gene3D Phosphorylase Kinase; domain 1 8 123 - -
Pvu8g0289 348 ProSiteProfiles Protein kinase domain profile. 47 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0289 348 Pfam Protein tyrosine and serine/threonine kinase 49 302 IPR001245 GO:0004672|GO:0006468
Pvu8g0289 348 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 331 - -
Pvu8g0289 348 SUPERFAMILY Protein kinase-like (PK-like) 22 303 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0289 Pvu-Chr8 2348905 2350034 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0289 3 319 Receptor kinase-like Gene Family AT3G51550 38.922 2.02e-65 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0289 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0289 - - pvu:PHAVU_008G028600g 580.096