Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0288 ATGTTTCTGAAATGTTTGGGCAACACAAGTTCATCTAAGAAACAGTATCTAACAGTAATAGAAGAGTTGTGCCATCAGTTTTCTCTTGCGGAGCTAAGAAAGTCAACAAACAACTTCGATAGAAAGAGACTAATTGGACGTGGAGGATTTGGTGAAGTGTATAAAGGGTATCTCCAACATTATGCTGCTTCTAATTATGTTGTAGCAGTGAAGCGGTTTTCTGTGGAACACAGTGAAGTGTTCAAGAATGAAATAGAGTTGCTGTGCCAGCTTCGTCACCCTAATTGTGTGTCTCTTATAGGATTCTGCAACCACAAGAAAGAGAAGATTCTTGTGTACGAGTACATGTCCAATGAATCTTTGGATCGACACCTACAACGTGGGGAACTATCATGGAACCAAAGGTTGGAAATTTGCACAGGAGCAGCGCGTGGACTACACTACCTTCATGCAGGAGCCAAGCGCACCATCATTCACCGTATTGTCAAACCTAGAACCATTCTTTTGGACGACAACATGCAACCAAAACTCACAGGTTTCTGCATTAGCGTAAAGGGGTCACGCTTCATGTCAAAGCCAAAGCCAATTAAAGTTGATGTTGTGGCAGGTACTCCTGGATACATGGCTAGGGAGCTTTTCACGGACGATGCCATCACAGAGAAATCTGATGTTTATTCATTTGGTATGGTTTTGCTAGAAGTTGTGTGTGGAAGGAAATACGTAACAATGCCAATTGAAAGAGAATTTCTGGAGAAGCCTCTTGAGGAAAAAGTTGATGCGAGCATCAAGGGAAAGATTGCACCAAAGTGTTGGGAAGTCTTTATAGATATAACCAAAAGATGCGTGATGTATGAACCAGATGAGCGACCAACAATGGGTGAAGTAGAGGTGCAACTAGAGCATGCTTTGTCGTTGCAGGAACAAGCTGATATCACAAATACTAATGGTGATTATATCTTATTTTCCACCACAGTTATTCACCCAGGAGCGGAACTGGTATACAGCACAGAAAACAGTGATACTGAAGAAATATAA 1035 0.4164 MFLKCLGNTSSSKKQYLTVIEELCHQFSLAELRKSTNNFDRKRLIGRGGFGEVYKGYLQHYAASNYVVAVKRFSVEHSEVFKNEIELLCQLRHPNCVSLIGFCNHKKEKILVYEYMSNESLDRHLQRGELSWNQRLEICTGAARGLHYLHAGAKRTIIHRIVKPRTILLDDNMQPKLTGFCISVKGSRFMSKPKPIKVDVVAGTPGYMARELFTDDAITEKSDVYSFGMVLLEVVCGRKYVTMPIEREFLEKPLEEKVDASIKGKIAPKCWEVFIDITKRCVMYEPDERPTMGEVEVQLEHALSLQEQADITNTNGDYILFSTTVIHPGAELVYSTENSDTEEI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0288 344 Gene3D Transferase(Phosphotransferase) domain 1 116 323 - -
Pvu8g0288 344 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 322 - -
Pvu8g0288 344 SUPERFAMILY Protein kinase-like (PK-like) 13 299 IPR011009 -
Pvu8g0288 344 ProSiteProfiles Protein kinase domain profile. 39 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0288 344 Gene3D Phosphorylase Kinase; domain 1 4 115 - -
Pvu8g0288 344 Pfam Protein tyrosine and serine/threonine kinase 42 298 IPR001245 GO:0004672|GO:0006468
Pvu8g0288 344 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
Pvu8g0288 344 PANTHER OS07G0166700 PROTEIN 10 322 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0288 Pvu-Chr8 2344633 2346203 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0288 8 310 Receptor kinase-like Gene Family AT3G51550 42.812 1.31e-71 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0288 PK_Tyr_Ser-Thr 7.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0288 - - gmx:100305395 469.544