Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0281 ATGGGTTCAGTTTGTTGCTGTTTTAATGTTGATGATTTTGAAGATTATATGAATCCAAATAGTCCTGTATATAGGAACTGCATGTGTCTCAGTTGCTTCCTGCAGAACTTTTTGACTGTGTATGCATCAATATTCCGTAGAGGGGAAGCGCATACGATTCCTTCATCTATACAGGGCACAACATCTATGACTTCTACAGCTTCACTTGATAATTCTCTATCTGACATGTACCGCTCTCCTCCAAGGCCCTTGCCTTATGATTCAGACCCCAGGTTTTTCCGTTCACAGCGTGATGGACTAGTGTCAAGACGTGAGAAGGGTTCAAGTCATTTGAATGAAGAGTCAGAACCTCTAAGAGGTGATGTAGATGCTGACTCAGAATCTTTAAATTTGGGTGGTAAATGGAATGATACCGGTGAAGATGGATCAAAGGAATACCGTAAGTCCTCTGTGAGACTTTCATCAGCAAAACTTACGACTGGAGCTGGGGTTGTCTATTCGTCATCAGAAGTGGAGGATGTCTGTCCAACATGTCTTGAAGAATACACTGAAGAGAATCCAAAGATAGTGACCAAATGCTCTCATCATTTTCATCTTGGTTGCATTTATGAGTGGATGGAAAGAAGTGACAACTGTCCTGTTTGTGGGAAGGAGATGGTATTCGATGAAACGACTTAA 678 0.4159 MGSVCCCFNVDDFEDYMNPNSPVYRNCMCLSCFLQNFLTVYASIFRRGEAHTIPSSIQGTTSMTSTASLDNSLSDMYRSPPRPLPYDSDPRFFRSQRDGLVSRREKGSSHLNEESEPLRGDVDADSESLNLGGKWNDTGEDGSKEYRKSSVRLSSAKLTTGAGVVYSSSEVEDVCPTCLEEYTEENPKIVTKCSHHFHLGCIYEWMERSDNCPVCGKEMVFDETT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0281 225 ProSiteProfiles Zinc finger RING-type profile. 175 215 IPR001841 -
Pvu8g0281 225 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 224 - -
Pvu8g0281 225 Pfam RING-H2 zinc finger domain 169 215 IPR024766 GO:0008270
Pvu8g0281 225 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 224 - -
Pvu8g0281 225 MobiDBLite consensus disorder prediction 55 75 - -
Pvu8g0281 225 SUPERFAMILY RING/U-box 171 222 - -
Pvu8g0281 225 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 223 IPR013083 -
Pvu8g0281 225 MobiDBLite consensus disorder prediction 55 146 - -
Pvu8g0281 225 SMART ring_2 175 215 IPR001841 -
Pvu8g0281 225 MobiDBLite consensus disorder prediction 91 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0281 Pvu-Chr8 2281913 2288275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0281 1 224 C3H Transcription Factor Family AT5G15790 60.173 1.16e-96 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0281 - - gmx:100788192 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0281 8 2281913 2288275 Pvu8g0281 8 2281913 2288275 ECH