Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0279 ATGTTTCTCAAATGGTTTGGTGAATCAAGTTCATCTGGGAGACAATATCCAACAGTGATAGAAGAGTTGTGCACTCATTTTTCTCTGGACGATGTTAGAAAATCAACCAACAATTTTGATGAGAACAGAGTACTTGGACGTGGAAGATGTGGTTTTGTGTACAAAGGTCGTCTCCAACATAATGATGGTTCTGATTACGCAGTCGCCGTGAAGCGATTTGATGTGCACAACAGTAAAGGGTTCAAAAAAGAAGTAGAGTTACTGTGTCAGCTTCATCACCCTAATTGTGTGTCTATTGTGGGATTTTGCAACCACAAAAACGAGAGTATTGTTGTGTATGAGTACATGTACAATGGATCTCTAGATCAACACCTGGGAGATAGGAAAGCACTTTCATGGAAGAAAAGAGTAGAGATTTGCATAGGAGCAGCACGTGGACTACACTACCTTCATGCAGGACTCAAGCGCACCATCATTCACCGTCACATCAATCCTAGCAGCATTCTTTTGGATGACAACATGCATCCAAAACTCTCAAGTTTTGGATATAGCATATTAGGAGCACATTTCAAGGAAAAACCAAAACCAAAACAATCGATTTATGCAGGTATTTTGCCCTACTCACCTGAGGAGATCTTTTTTGGTACTGTCACGGATAGATCTGATGTTTACGCATTTGGTATGGTTCTACTGCAAGTTGTGATGACAAGAAGATTTTTTAAATCGGATTTTATTGGAGCAGCAGGAGAACCACTGGAGAAGAAGAGTGTTGAGGAGAATATTGATCCGAAAATCAAAGGGAAGATTGCACCAGAGTGTTGGAAAGTCTTTATAGATATCGCCTTAAGATGCATAATGAAGGAACCTGATGAACGACCAACAATGGGTGAAGTTGAGGAGGAACTTGAGCTTGCTCTATTGTTGCAGGAACAAGCAGATGTCACAAACATCAATAGTGATTATACCTTATTGTCCAAAACCATTCTCCCAAAATCAGAGGGATTTGAGTATGGCATTGACCTTTAA 1026 0.4016 MFLKWFGESSSSGRQYPTVIEELCTHFSLDDVRKSTNNFDENRVLGRGRCGFVYKGRLQHNDGSDYAVAVKRFDVHNSKGFKKEVELLCQLHHPNCVSIVGFCNHKNESIVVYEYMYNGSLDQHLGDRKALSWKKRVEICIGAARGLHYLHAGLKRTIIHRHINPSSILLDDNMHPKLSSFGYSILGAHFKEKPKPKQSIYAGILPYSPEEIFFGTVTDRSDVYAFGMVLLQVVMTRRFFKSDFIGAAGEPLEKKSVEENIDPKIKGKIAPECWKVFIDIALRCIMKEPDERPTMGEVEEELELALLLQEQADVTNINSDYTLLSKTILPKSEGFEYGIDL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0279 341 Gene3D Phosphorylase Kinase; domain 1 6 115 - -
Pvu8g0279 341 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 325 - -
Pvu8g0279 341 ProSiteProfiles Protein kinase domain profile. 39 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0279 341 PANTHER OS07G0166700 PROTEIN 10 325 IPR045272 GO:0004714|GO:0006468
Pvu8g0279 341 Pfam Protein tyrosine and serine/threonine kinase 42 302 IPR001245 GO:0004672|GO:0006468
Pvu8g0279 341 Gene3D Transferase(Phosphotransferase) domain 1 116 324 - -
Pvu8g0279 341 SUPERFAMILY Protein kinase-like (PK-like) 13 303 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0279 Pvu-Chr8 2276317 2277441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0279 7 313 Receptor kinase-like Gene Family AT3G51550 39.375 5.81e-68 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0279 PK_Tyr_Ser-Thr 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0279 - - var:108327132 439.113