Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0278 ATGTTTCTAAAATGTTTTGGTGAATCAAGTTCATCTGGGAGACAGTATCCAACAGTGATAGAAGAGTTGTGCACTCATTTTTCTCTGGACGATCTTAGAAAATCAACCACCAATTTTGATGATAAGAGAGTAATTAGAAGTGAAGGATGTGGTATTGTATACAAAGGTTGTCTCCAATATAATGATGGTTCTGATTACGCAGTCGAAGTGAAGAGATTTAATGTGCTCAACAGTAAAGAGTTCAAAAAACAAGTAGAGTTACTGTGTCAGCTTCATCACCCTAATTGTATGTCTATTGTGGGATTTTCCAACCACAAAAAATGGAGTTTTGTTGTGTATGAGTACATGTCCAATGAATCTCTAGATCACCACCTGAGTGGTAAGGTCAGGGAAGCACTTTCATGGAAGAAAAGAGTAGAGATTTGCATAGGAGCAGCACGTGGACTACACTACCTTCATGCAGGACTCAAGCGCACCATCATTCACCGTCATATCCATCCTAGCAACATTCTTTTGGATGACAACATGCACCCAAAAGTCTCAGGTTTTGATTATAGCATACTAGGAGCACATTTCAAGGAAAAGCCAAAACCAATCAAATCGAATATTATAGGTTTTCTGGAATACTTACCTACGGAGGCCTTTACGGAGGGTACTTTCACAGATAGATCTGATGTTTACTCATTTGGTATGGTTCTACTGGAAGTTGTGGGGGCAAGAAGATTTTTTAAACCGATTTATTTTGAAGTAGCAGGAGAACCACTGGAGAAGAATTGTGTTGAGGAGAATATTGATCCGAAAATCAAAGGGAAGATTGCACCAGAATGTTGGAAAGTCTTTATAGATATCACCTTAAGATGCTTACAGAGTGAACCTGATGAACGACCAACAATGGGTGAAGTTGAGGTGGAACTTGAGCTTGCTCTATTGTTGCAGGAACAAGCAGATGTCACAAACATCAATAGTGATTATACCTTATTGTCCAAAACCACTATTATCCCAAAATCAGACTGGAGATTTGAGTATGTCATTGACTAG 1038 0.3882 MFLKCFGESSSSGRQYPTVIEELCTHFSLDDLRKSTTNFDDKRVIRSEGCGIVYKGCLQYNDGSDYAVEVKRFNVLNSKEFKKQVELLCQLHHPNCMSIVGFSNHKKWSFVVYEYMSNESLDHHLSGKVREALSWKKRVEICIGAARGLHYLHAGLKRTIIHRHIHPSNILLDDNMHPKVSGFDYSILGAHFKEKPKPIKSNIIGFLEYLPTEAFTEGTFTDRSDVYSFGMVLLEVVGARRFFKPIYFEVAGEPLEKNCVEENIDPKIKGKIAPECWKVFIDITLRCLQSEPDERPTMGEVEVELELALLLQEQADVTNINSDYTLLSKTTIIPKSDWRFEYVID* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0278 345 Gene3D Transferase(Phosphotransferase) domain 1 116 328 - -
Pvu8g0278 345 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 328 - -
Pvu8g0278 345 ProSiteProfiles Protein kinase domain profile. 39 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0278 345 Pfam Protein tyrosine and serine/threonine kinase 50 303 IPR001245 GO:0004672|GO:0006468
Pvu8g0278 345 SUPERFAMILY Protein kinase-like (PK-like) 14 310 IPR011009 -
Pvu8g0278 345 Gene3D Phosphorylase Kinase; domain 1 7 115 - -
Pvu8g0278 345 PANTHER OS07G0166700 PROTEIN 10 328 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0278 Pvu-Chr8 2272940 2274087 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0278 7 316 Receptor kinase-like Gene Family AT3G51550 37.812 2.95e-65 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0278 PK_Tyr_Ser-Thr 2.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0278 - - var:108327132 460.299