Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0275 ATGTTTTTCAAATGTTTTGGTGAATCAAGTTCATCTGCGAGACAGTATCCAACAGTGATAGAAGAGTTGTGCACTCATTTTTCTCTGGACGATGTTAGAAAATCAACCAACAATTTTGATGATAAGAGAGTAATTGGACGTGGAAGATTTGGTATTGTATACAAAGGTTGTCTCCAACATAATGATGGTTCTGATTACGCAGTCGCAGTGAAGAGATTTCATGTGGACAGCAGTGAATGGTTCAAAAAAGAAGTAGAGATACTGTGTCAGCTTCATCACCCTAATTGTGTGTCTATTGTGGGATTTTGCAGACACGAAAAAGAGAAAATTATTGTGTATGAATACATGTCCAATGGATCTCTAGATCGACACCTGGGAGATGAGGTTAGGGAAGCACTTTCATGGAAGAAAAGAGTAGAGATTTGCATAGGAGCAGCACGTGGACTACACTACCTTCATGCAGGACTCAAGCGCACCATCATTCACCATGATATCCGTCCTCGCAAAATTCTTTTGGATGACAACATGCACCCAAAACTCACGGGTTTTGAACATAGCATAGTAGGAGCACATTTCAAGGAAAAGCCAAAACCAATACAATCGAATCTTGCACGTTTTTCGCTCTACTCACCTCTGGAGACCGTCATGGAGGGTACTGTCACAGATAGATCTGATGTTTACGCATTTGGTATGGTTCTACTGAAAGTTGTGGCGGCAAGAAGAGTTCTTAAACGGAATGATTTTGGAGTAGCAGCAGGAGAAACACTGGAGAAGAAGAGTGTTGAGGAGAATATTGATCCGAAAATCAAAGGGAAGATTGTACCAGAGTGTTGGAAAGTCTTTATAGATATCGCCTTAAGATGCATGAAGAATGAACGTGATGAACGACCAACAATGGGTGAAGTTGAGGTGGAACTTGAGCATGCTCTATTGTTGCAGGAACAAGCAGATGTCACAAACATCAATAGTGATTATACCTTACTGTCCAAAACATTTATTATCCCAAAATCAGGCAGGGAACTGGGTACGTCATTGACCAGTAAAAAGGACAGTAAACTGAATGCAATGACTTAG 1074 0.4069 MFFKCFGESSSSARQYPTVIEELCTHFSLDDVRKSTNNFDDKRVIGRGRFGIVYKGCLQHNDGSDYAVAVKRFHVDSSEWFKKEVEILCQLHHPNCVSIVGFCRHEKEKIIVYEYMSNGSLDRHLGDEVREALSWKKRVEICIGAARGLHYLHAGLKRTIIHHDIRPRKILLDDNMHPKLTGFEHSIVGAHFKEKPKPIQSNLARFSLYSPLETVMEGTVTDRSDVYAFGMVLLKVVAARRVLKRNDFGVAAGETLEKKSVEENIDPKIKGKIVPECWKVFIDIALRCMKNERDERPTMGEVEVELEHALLLQEQADVTNINSDYTLLSKTFIIPKSGRELGTSLTSKKDSKLNAMT* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0275 357 Pfam Protein tyrosine and serine/threonine kinase 42 304 IPR001245 GO:0004672|GO:0006468
Pvu8g0275 357 ProSitePatterns Protein kinases ATP-binding region signature. 45 71 IPR017441 GO:0005524
Pvu8g0275 357 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 329 - -
Pvu8g0275 357 ProSiteProfiles Protein kinase domain profile. 39 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0275 357 SUPERFAMILY Protein kinase-like (PK-like) 16 310 IPR011009 -
Pvu8g0275 357 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Pvu8g0275 357 Gene3D Phosphorylase Kinase; domain 1 5 115 - -
Pvu8g0275 357 PANTHER OS07G0166700 PROTEIN 10 329 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0275 Pvu-Chr8 2260520 2262552 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0275 18 317 Receptor kinase-like Gene Family AT3G51550 39.355 1.52e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0275 PK_Tyr_Ser-Thr 2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0275 - - var:108327132 440.654