Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0273 ATGTTTCTCAAATGTGTTGGTAAATCAAGTACATCTGGGAGACAATATCCAACAGTGATAGAAGAGTTGTGCACTCATTTTTCTCTGGACGATGTTAGAAAATCAACCAACAATTTTGATGATAAGAGAGTAATTGGCAATGGAGGAAGTGGTATTGTATACAAAGGTTGTCTCCAACATAATGATGGTTCTGATTACGCAGTCGAAGTGAAGAGATTTCATATGCTCGAATGTAAATGGTTCAAAAAAGAAGTAGAGTTACTGTGTCAGCTTCATCACCCTAATTGTGTGTCTATTGTGGGATTTTGCAACCACAAAAAAGTGAGTATTGTTGTGTATGAATACATGTCCAATATGTCCAATGGATCTCTAGATCAACACCTAGAAGAAGGTCAACTATCATGGAAGAAAAGAGTAGAGATTTGCATAGGAGCAGCACGTGGACTACACTACCTTCATGCAGGACTCAAGCGCACCATCATTCACCGTCACATCAATCCTAGCAGCATTCTTTTGGATGACAAGATGCATCCAAAACTCTCAAGTTTTGGATATAGCATACTAGGAGCACATTTCAAGGAAAAGCCAAAACCAAAACAATCGATTTATGCAGGTTCACGAGCATTATGTTACGAGGATGCGAAAGAAGTTGCAATTTGA 660 0.3864 MFLKCVGKSSTSGRQYPTVIEELCTHFSLDDVRKSTNNFDDKRVIGNGGSGIVYKGCLQHNDGSDYAVEVKRFHMLECKWFKKEVELLCQLHHPNCVSIVGFCNHKKVSIVVYEYMSNMSNGSLDQHLEEGQLSWKKRVEICIGAARGLHYLHAGLKRTIIHRHINPSSILLDDKMHPKLSSFGYSILGAHFKEKPKPKQSIYAGSRALCYEDAKEVAI* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0273 219 Pfam Protein tyrosine and serine/threonine kinase 42 187 IPR001245 GO:0004672|GO:0006468
Pvu8g0273 219 PANTHER OS07G0166700 PROTEIN 10 206 IPR045272 GO:0004714|GO:0006468
Pvu8g0273 219 Gene3D Transferase(Phosphotransferase) domain 1 119 210 - -
Pvu8g0273 219 ProSiteProfiles Protein kinase domain profile. 39 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0273 219 SUPERFAMILY Protein kinase-like (PK-like) 13 193 IPR011009 -
Pvu8g0273 219 Gene3D Phosphorylase Kinase; domain 1 5 115 - -
Pvu8g0273 219 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0273 Pvu-Chr8 2251608 2254244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0273 7 189 Receptor kinase-like Gene Family AT5G39000 43.229 1.19e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0273 PK_Tyr_Ser-Thr 3e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0273 - - var:108327132 293.123