Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0272 ATGTTTCTCAAATGTTTTGGTGAATCAAGTTCATCTGGGAGACAATATCCAACAGTGATAGAAGAGTTGTGCACTCATTTTTCTCTGGACGATCTTAGAAAATCAACCAACAATTTTGATCCTAAGAGAGTAATTGGACGATTTGGTAATGTATACAAAGGTTGTCTCCAACATAATGATGGTTCTGATTACGCAGTCGCAGTGAAGATATTTTATGAGTACAACAGTAAATGGTTCGAAAAAGATGTAGAGTTACTGTGTCAGCTTCATCACCCTAATTGTGTGTCTATTGTGGGATTTTGCAGACACGAAAAACAGAGTATTATTGTGTATGAATACATGTCCAATGGATCTCTAGATCAACACCTGAGAGGTGAGGTGAGGGAAGCACTTTCATGGAAGAAAAGAGTAGAGATTTGCATAGGAGCAGCACGTGGACTACACTACCTTCATGCAGGACTCAAGCGCACCATCATTCACCGTAATATCCATCCTAGCAGCATTCTTTTGGATGACAACATGCACCCAAAACTCTCAGGTTTTGAATTTAGCATACTAGGAGCACATTTCAAGGAAAAGCCAAAACCAATCAAATCGGATCTTGCAGGTTTTTGGGAATACTCACCTATGGAGGCCTTGACGGAGGGTACTTTCACAGATAGATCTGATGTTTACTCATTTGGTATGGTTCTACTGGAAGTTGTGGGGGCAAGAAGATTTTTTAAACCGAATGATTTTGGAGTAGCAGCAGGAGAACCACTGGAGAAGAAGTCTGTTGAGGAGAATATCGATCCGAAAATCAAAGGGAAGATTGCACCAGAGTGTTGGCAAGTCTTTATAGATATCATCTTAAGATGCTTACAGAATGAACCTGATGAACGACCAACAATGGGTGAAGTTGAGGTGGAACTTGAGCATGCTCTATTGTTGCAGGATCAAGCAGATGTCACAAACATCAATAGTGATTATACCTTATTGTCCGAAACCTTTATTATCCCAAAATCAGACTGGAGATTTGAGTATGTCATTGACCAGTAA 1038 0.3998 MFLKCFGESSSSGRQYPTVIEELCTHFSLDDLRKSTNNFDPKRVIGRFGNVYKGCLQHNDGSDYAVAVKIFYEYNSKWFEKDVELLCQLHHPNCVSIVGFCRHEKQSIIVYEYMSNGSLDQHLRGEVREALSWKKRVEICIGAARGLHYLHAGLKRTIIHRNIHPSSILLDDNMHPKLSGFEFSILGAHFKEKPKPIKSDLAGFWEYSPMEALTEGTFTDRSDVYSFGMVLLEVVGARRFFKPNDFGVAAGEPLEKKSVEENIDPKIKGKIAPECWQVFIDIILRCLQNEPDERPTMGEVEVELEHALLLQDQADVTNINSDYTLLSETFIIPKSDWRFEYVIDQ* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0272 345 PANTHER OS07G0166700 PROTEIN 10 327 IPR045272 GO:0004714|GO:0006468
Pvu8g0272 345 Pfam Protein tyrosine and serine/threonine kinase 46 302 IPR001245 GO:0004672|GO:0006468
Pvu8g0272 345 Gene3D Phosphorylase Kinase; domain 1 7 113 - -
Pvu8g0272 345 ProSiteProfiles Protein kinase domain profile. 37 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0272 345 SUPERFAMILY Protein kinase-like (PK-like) 14 308 IPR011009 -
Pvu8g0272 345 Gene3D Transferase(Phosphotransferase) domain 1 114 326 - -
Pvu8g0272 345 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0272 Pvu-Chr8 2247601 2248925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0272 7 315 Receptor kinase-like Gene Family AT3G51550 37.188 7.68e-64 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0272 PK_Tyr_Ser-Thr 3.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0272 - - var:108327132 460.299