Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0258 ATGGTTGATCAAGGCGATTTAGTTGTCATATGTGTCTCTATTGGAGTGGCCCTTGGGGTTTTGATGGCTTGCTTAGTGTATTTTGGAATAAGGTGGTACAATAAGCGAACTCATCTTAGCCGATCTGCGAATGAGCCTAGTTTAACAGCTATCCCTATACGAACAAATGGATTAGGAACAAGCACTGACTTCAGTGCTTCCCTCACCAGTTCGGTAGCCACTTATAGATCACCAAATCCTTCAAAAAACTCTCCAGCTGGGTGGAATCATCAGAATAAAGATGCGTTTGCTTCTGTATCAGGCATTCTGAGGTACTCATACAAGGAAATTCAAAAGGCCACACAAAATTTCACAAATACTTTGGGAGAAGGGTCATTTGGCACAGTTTATAAAGCCACAATGCCTACAGGAGAGGTGGTAGCTGTGAAGATGCTTGCACCCAATTCCAAACAAGGGGAGAAAGAATTTCTAACGGAGGTGCTTCTGCTAGGAAGACTGCATCATCGGAATCTTGTGAATTTGTTAGGGTACTGCGTAGATAAAGGACAGCTTATGCTTGTTTACGAGTTCATGAGTAATGGAAGTTTAGAAAACCTTTTATATGGTGATGAAAAAGAATTGAGTTGGGATGAAAGGCTGCAAATTGCTGTTGATATTTCACACGGAGTAGAATACCTTCATGAAGGGGCAGTACCACCCATTGTACATCGTGATTTGAAATCTGCTAATATTCTGCTAGATCACTCAATGAGAGCTAAGGTTTCTGATTTTGGGCTCTCAAAGGAAGAGATCTTTGATGGCCGTAATTCTGGCCTTAAAGGTACATATGGCTACATGGATCCAGCATACATTTCCTCGAGCAAGTTCACAGTGAAGAGTGACATTTACAGTTTTGGTATAATAATTTTTGAGCTCATCACTGCCATCCACCCACATCAAAATTTGATGGAATATATCAACCTTGCTGCAATGGATTACGATGGTGTAGATGGGATTCTTGACAAGCAACTTGTGGGAAAATGCAATGTTGAAGAAGTGAGACAGCTTGCTAAAATTGCACATAAATGTTTGCACAAATCACCTAGGAAACGCCCCTCTATAGGTGAGGTTTCGCAGGCTATATTGGGGATTAGGCAAAGGCGCCTCGTGAAAGAAGACACCATGTCATTTGCAAGCACCAACTTCTCCCGAAGTGTGAGTCAAATAGAGGAACAACAGATTGAATTAAGTAGAATAATCACCATGAACCACAGGGAAATGGGGTGA 1266 0.4163 MVDQGDLVVICVSIGVALGVLMACLVYFGIRWYNKRTHLSRSANEPSLTAIPIRTNGLGTSTDFSASLTSSVATYRSPNPSKNSPAGWNHQNKDAFASVSGILRYSYKEIQKATQNFTNTLGEGSFGTVYKATMPTGEVVAVKMLAPNSKQGEKEFLTEVLLLGRLHHRNLVNLLGYCVDKGQLMLVYEFMSNGSLENLLYGDEKELSWDERLQIAVDISHGVEYLHEGAVPPIVHRDLKSANILLDHSMRAKVSDFGLSKEEIFDGRNSGLKGTYGYMDPAYISSSKFTVKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMDYDGVDGILDKQLVGKCNVEEVRQLAKIAHKCLHKSPRKRPSIGEVSQAILGIRQRRLVKEDTMSFASTNFSRSVSQIEEQQIELSRIITMNHREMG* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0258 421 ProSiteProfiles Protein kinase domain profile. 115 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0258 421 PANTHER OS01G0750732 PROTEIN 9 418 - -
Pvu8g0258 421 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Pvu8g0258 421 SUPERFAMILY Protein kinase-like (PK-like) 92 372 IPR011009 -
Pvu8g0258 421 SMART serkin_6 115 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0258 421 Gene3D Phosphorylase Kinase; domain 1 89 190 - -
Pvu8g0258 421 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 418 - -
Pvu8g0258 421 Pfam Protein tyrosine and serine/threonine kinase 117 372 IPR001245 GO:0004672|GO:0006468
Pvu8g0258 421 Gene3D Transferase(Phosphotransferase) domain 1 191 398 - -
Pvu8g0258 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pvu8g0258 421 CDD STKc_IRAK 121 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0258 Pvu-Chr8 2136230 2140612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0258 110 374 Receptor kinase-like Gene Family AT1G67720 45.848 2.43e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pvu8g0258 PK_Tyr_Ser-Thr 8.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0258 - - gmx:100794239 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0480 4 4990662 4992984 Pvu8g0258 8 2136230 2140612 PCT
Pvu8g0258 8 2136230 2140612 Pvu4g0473 4 4954681 4959412 PCT