Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0247 ATGACGATTAGTAGTTTAGCACCTAAGACAGAGAAGAAGAGATCAAGGAAGAACAAGGCAGTGGTTAATGAGAATGCGCCCTTGTTGCCGAAAAGTCATGTTCAGGAGAGTGATGCTGGGTTTGATGATTTCAACGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTATCCACTACAATTATTGGTGCTGGAATCATGGCGTTGCCTGCAACCTTGAAACAGTTGGGAATGGTGCCTGGCCTTATTGCTATCGTCATCATGGCCTTGTTGACAGAGAAGTCCATTGAGCTTTTGATTAGGTTTACCCGAGCAGGGAAGTCTGCTTCTTACGCTGGTCTCATGGGGGATTCATTTGGGAAGTATGGAAAAGCTCTGGCGCAGATATGTGTTATAATCAATAACATTGGTGTGCTCATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAAGCGGAGATCATCACTACGGTATCCTTGAAGGATGGTTTGGTGTGCAATGGTGGACAGGACGAACATTTGTTGTACTTGTTACAACACTCGCCATATTTGCACCGCTTGCGAGCTTTAAACGAATTGATTCATTGAGATTCACATCTGCCCTTTCAGTTGCACTGGCAGTTGTTTTTCTAGTCATTGCTGTGGGAATTGCAGTTGTCAAGATAATAAGTGGAGGCATTGAGATGCCCAGACTCTTCCCAGACGCCACCACAGATTTGGCATCATTCTTTAAACTATTCACTGTAGTTCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGTTCACAGCATAGACAATGAGCTTGAGGACTCATCACAGATGCGAGGGGTTGTACAAACTGCCCTTCTTCTATGTTCTTCTGTATATGTAATGATAAGCTTCTTCGGTTTTCTCCTGTTTGGGGATGGGACTCTTGATGATGTTTTGGCCAATTTCGATACCGATCTTGGAATCCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTACGCAGCACACCTGATGCTTGTATTCCCAGTTGTCTTCTATCCATTGCGGCTCAATATAGATGGTCTCCTCTTCTCTTCATCAAGGCCTCTGGTTCTGGATAACTTCAGATTTGCATCTGTGACTATTTCCCTTATTGGTGTAATCTTCCTGGGAGCAAATTTCATACCCAGCATTTGGGATGCTTTCCAGTTTACCGGAGCAACCGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATTGCAACTAAATCAGACAAGATTTTATCTGTTGTTATGATAGTCTTGGCCGTCTTCTCTAACGTGGTGGCTATATACAGTGATGCCTATGCATTGATCAAGCAGAACCAAACTTCACGAGAATGA 1401 0.4354 MTISSLAPKTEKKRSRKNKAVVNENAPLLPKSHVQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMVPGLIAIVIMALLTEKSIELLIRFTRAGKSASYAGLMGDSFGKYGKALAQICVIINNIGVLIVYMIIIGDVLSGTSSSGDHHYGILEGWFGVQWWTGRTFVVLVTTLAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIISGGIEMPRLFPDATTDLASFFKLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALLLCSSVYVMISFFGFLLFGDGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLDNFRFASVTISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILSVVMIVLAVFSNVVAIYSDAYALIKQNQTSRE* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0247 466 PANTHER AMINO ACID TRANSPORTER AVT6A 9 464 - -
Pvu8g0247 466 MobiDBLite consensus disorder prediction 1 22 - -
Pvu8g0247 466 Pfam Transmembrane amino acid transporter protein 47 452 IPR013057 -
Pvu8g0247 466 PANTHER AMINO ACID TRANSPORTER 9 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0247 Pvu-Chr8 2060889 2064482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0247 16 466 Amino Acid or Auxin Permease AAAP Family AT3G30390 69.536 0.0 641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0247 8 2060889 2064482 Pvu8g0247 8 2060889 2064482 ECH
Pvu4g0491 4 5108176 5112927 Pvu8g0247 8 2060889 2064482 PCT