Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0247 ATGACGATTAGTAGTTTAGCACCTAAGACAGAGAAGAAGAGATCAAGGAAGAACAAGGCAGTGGTTAATGAGAATGCGCCCTTGTTGCCGAAAAGTCATGTTCAGGAGAGTGATGCTGGGTTTGATGATTTCAACGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTATCCACTACAATTATTGGTGCTGGAATCATGGCGTTGCCTGCAACCTTGAAACAGTTGGGAATGGTGCCTGGCCTTATTGCTATCGTCATCATGGCCTTGTTGACAGAGAAGTCCATTGAGCTTTTGATTAGGTTTACCCGAGCAGGGAAGTCTGCTTCTTACGCTGGTCTCATGGGGGATTCATTTGGGAAGTATGGAAAAGCTCTGGCGCAGATATGTGTTATAATCAATAACATTGGTGTGCTCATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAAGCGGAGATCATCACTACGGTATCCTTGAAGGATGGTTTGGTGTGCAATGGTGGACAGGACGAACATTTGTTGTACTTGTTACAACACTCGCCATATTTGCACCGCTTGCGAGCTTTAAACGAATTGATTCATTGAGATTCACATCTGCCCTTTCAGTTGCACTGGCAGTTGTTTTTCTAGTCATTGCTGTGGGAATTGCAGTTGTCAAGATAATAAGTGGAGGCATTGAGATGCCCAGACTCTTCCCAGACGCCACCACAGATTTGGCATCATTCTTTAAACTATTCACTGTAGTTCCTGTGTTTGTGACTGCCTATATCTGCCACTACAATGTTCACAGCATAGACAATGAGCTTGAGGACTCATCACAGATGCGAGGGGTTGTACAAACTGCCCTTCTTCTATGTTCTTCTGTATATGTAATGATAAGCTTCTTCGGTTTTCTCCTGTTTGGGGATGGGACTCTTGATGATGTTTTGGCCAATTTCGATACCGATCTTGGAATCCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTACGCAGCACACCTGATGCTTGTATTCCCAGTTGTCTTCTATCCATTGCGGCTCAATATAGATGGTCTCCTCTTCTCTTCATCAAGGCCTCTGGTTCTGGATAACTTCAGATTTGCATCTGTGACTATTTCCCTTATTGGTGTAATCTTCCTGGGAGCAAATTTCATACCCAGCATTTGGGATGCTTTCCAGTTTACCGGAGCAACCGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATTGCAACTAAATCAGACAAGATTTTATCTGTTGTTATGATAGTCTTGGCCGTCTTCTCTAACGTGGTGGCTATATACAGTGATGCCTATGCATTGATCAAGCAGAACCAAACTTCACGAGAATGA 1401 0.4354 MTISSLAPKTEKKRSRKNKAVVNENAPLLPKSHVQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMVPGLIAIVIMALLTEKSIELLIRFTRAGKSASYAGLMGDSFGKYGKALAQICVIINNIGVLIVYMIIIGDVLSGTSSSGDHHYGILEGWFGVQWWTGRTFVVLVTTLAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIISGGIEMPRLFPDATTDLASFFKLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALLLCSSVYVMISFFGFLLFGDGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLDNFRFASVTISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILSVVMIVLAVFSNVVAIYSDAYALIKQNQTSRE* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0247 466 PANTHER AMINO ACID TRANSPORTER AVT6A 9 464 - -
Pvu8g0247 466 MobiDBLite consensus disorder prediction 1 22 - -
Pvu8g0247 466 Pfam Transmembrane amino acid transporter protein 47 452 IPR013057 -
Pvu8g0247 466 PANTHER AMINO ACID TRANSPORTER 9 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0247 Pvu-Chr8 2060889 2064482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0247 16 466 Amino Acid or Auxin Permease AAAP Family AT3G30390 69.536 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0247 K14207 - gmx:100796345 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0247 8 2060889 2064482 Pvu8g0247 8 2060889 2064482 ECH
Pvu4g0491 4 5108176 5112927 Pvu8g0247 8 2060889 2064482 PCT