Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0199 ATGGCTCTGGACCAGCCTTCCAATCCAAACGCCGTTGACGGGGCGGGTAACGGCGCGACGCCGTGCTCCGCCGCGGACGGAGGCGACGACGGGAGGCCGGCGGCGAGGCTGCCGCGGTGGACGCGGCAGGAGATTCTGGTGCTGATTCAGGGGAAGAGCGACGCGGAGAACCGGTTCAGACCGGGTCGGGGGAGCGGTTCGGCGTTCGGATTGAGCGAACCGAAATGGGCGCTGGTGTCGGCGTACTGCAAAAAGCACGGCGTGAACCGGGAGCCGGTGCAGTGCCGGAAGCGGTGGAGCAACCTCGCCGGCGATTACAAGAAGATCAAGGAGTGGGAGTTGCAGGTCAGAGACGAAACGGACTCGTTTTGGCTCATGAGGAACGATTTGAGGAGGGAGAGGAAATTGCCCGGTTATTTTGACAGGGAAGTGTATAATATTCTTGATTCGCCGTCCACGGCGGCTGCTGCGACGGCCGAGACTCCTACGGCGGCGGTGGAGGCGGCGGGGGATGAGGAAGTGCACCTGTATGATAGTAATCGGAGAGTTGGGAGTGATGATGGGTTGTTCTCTGATTGTGAAAAGGAGGAGATTTTGCTTTTAGCCCCTGGCAAGGATGTTCCTGCACCTGTTCCAATCTCAGAGAAGCAGTTTCAACCACTCCTTCAACTATGTGAAGGAGAAGGCAATGCTCAAGGTACTACCAATGAGAAACGTGCAACCCCAAATCCAGAAATGGGATCTACATCTCAAGGGGGACGGAAGAGGAAGCGATTTTCCGATGCAGAGGAGGAAAGTTTGCAAAGTCAATTAATTGACGTCTTAGAAAAGAATGGCAAAATGCTTCGTGATCACCTTGAATCTCAGAACGCCAATTTCCAATTGGACCGCCAGCAGCAGAAAGACACTGCAACTAACATAGTTGCTGTACTTGATAAGCTTGCAGATGCTCTAGGGAGAATTGCTGATAAATTGTAG 978 0.545 MALDQPSNPNAVDGAGNGATPCSAADGGDDGRPAARLPRWTRQEILVLIQGKSDAENRFRPGRGSGSAFGLSEPKWALVSAYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWELQVRDETDSFWLMRNDLRRERKLPGYFDREVYNILDSPSTAAAATAETPTAAVEAAGDEEVHLYDSNRRVGSDDGLFSDCEKEEILLLAPGKDVPAPVPISEKQFQPLLQLCEGEGNAQGTTNEKRATPNPEMGSTSQGGRKRKRFSDAEEESLQSQLIDVLEKNGKMLRDHLESQNANFQLDRQQQKDTATNIVAVLDKLADALGRIADKL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0199 325 ProSiteProfiles Myb-like domain profile. 32 103 IPR001005 -
Pvu8g0199 325 Pfam Myb/SANT-like DNA-binding domain 39 124 IPR044822 -
Pvu8g0199 325 MobiDBLite consensus disorder prediction 228 263 - -
Pvu8g0199 325 Gene3D - 40 108 - -
Pvu8g0199 325 CDD GT1 38 110 - -
Pvu8g0199 325 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 325 - -
Pvu8g0199 325 MobiDBLite consensus disorder prediction 1 38 - -
Pvu8g0199 325 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 1 325 - -
Pvu8g0199 325 MobiDBLite consensus disorder prediction 228 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0199 Pvu-Chr8 1679502 1683548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0199 39 111 Trihelix Transcription Factor Family AT1G33240 34.247 9.35e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu8g0199 Myb_DNA-bind_4 2.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0199 - - gmx:100788594 566.614