Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0197 ATGTTTAGGAAAAGGCACATCGCTTCTTCTCTTGCTAGGGAATTGTTGGCACTCCAGCCACTTCTTATTCTGTTCCTGTTCAGTTTGCACCACCACACTGTGCAATGTCAAGGAAGGTTGAGTAAACATGTTTCTTCAGAGCCTCCCTCACCTTCTAGGACATCACCACCGTCATCATCAGGATACAGGGATGACCCCAAGAAGATAATTTTGAGCATGGTGTTAGGAGCAGTAACTGGTCTAGTTTGTTCTGTTCTCTTTGCACTTGTGGTACGTTGTGTGGTGCAGTACCTTAACCGCACACCAATCCTCAAGGGCCCTGTTATATTCTCCCCCAAAATTGCCCCCAAGACACTCCAATTAGCTTTGGCCAAGGAAAACCACTTGCTTGGCTCGAGTCCTAATGGGAAATACTACAAAACTGTGCTTGACAATGGACTCACTATTGCAGTGAAAAGGCTAACACCCTTTGAGAGCAACTCTCCAGAGGCTAGGAAAAATTCAGTGAAGAGGCAGATACAAACTGAGCTAGAGCTTCTTGCAAGCTTAAGACACAGAAACTTGATGAGTTTGAGGGCCTATGTTCGTGAGCCTGATGGTTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTTGCTGATGTGATGAATAAAGTGTGGGAGAATGAGTTGCCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACTTGTGCGCCTCAGATTCTGCACTACAGCTTGAAGCCAACAAATGTGATGTTGGATGCTGATTTTGAACCCAGATTAGCAGACTATGGCTTGGCCAAACTTCTACCCAACTTGGATAGAGGAACCTCTCTCTACACACCTCCTGAATGTTTCCACAATTGCAGGTACACAGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTGTTTTGTTAACGGGTAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGCCAGTGGGGGAAGTTTGGGATGTTGGCTGAGACACTTGCAGCAAGCAGGTGAGGCAAGGGATGCCCTAGATAAGAGCATGTTAGGGGAAGAAGGAGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTGTTCACATGCTAACTCAACTGCACAGTTTTTGA 1218 0.4598 MFRKRHIASSLARELLALQPLLILFLFSLHHHTVQCQGRLSKHVSSEPPSPSRTSPPSSSGYRDDPKKIILSMVLGAVTGLVCSVLFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQLALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEARKNSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVMNKVWENELPFGWEVRLRIAVGVVKGLQYLHFTCAPQILHYSLKPTNVMLDADFEPRLADYGLAKLLPNLDRGTSLYTPPECFHNCRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEARDALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0197 405 CDD STKc_IRAK 130 402 - -
Pvu8g0197 405 Gene3D Phosphorylase Kinase; domain 1 117 207 - -
Pvu8g0197 405 PANTHER - 11 405 - -
Pvu8g0197 405 Pfam Protein kinase domain 126 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0197 405 ProSiteProfiles Protein kinase domain profile. 124 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0197 405 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 11 405 - -
Pvu8g0197 405 SUPERFAMILY Protein kinase-like (PK-like) 127 399 IPR011009 -
Pvu8g0197 405 MobiDBLite consensus disorder prediction 40 63 - -
Pvu8g0197 405 Gene3D Transferase(Phosphotransferase) domain 1 208 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0197 Pvu-Chr8 1661717 1664641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0197 34 402 Receptor kinase-like Gene Family AT2G31880 32.524 4.75e-66 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Pvu8g0197 Pkinase 1.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0197 - - vra:106759565 714.916