Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0185 ATGACTCAGGCGGTGGAGGTGCTGAATAGGTATGGGACGGATATGGTGGGGGAGCCCAGGGGTTCTGATTCGGAGTGTTTGGCGGGTTTCGAGTGTTTTCTGAACATTGTGAGGGCACTGGGAATGGGATCGTGCATTTCGGAGGTTGGGGCTGGTGGTAGTTCCGATCCTCTTCTTTCTGATTCCAATACGGATGGGAAGAGGAGGAGGTTGAGGGGTTCCTCGTCCTTTGATTTCAGAGTGCCCGGGAGAATGTCCTCGAATGGATCAAGCGAGGTTGCATCCATGTTTTGTAAGCAAGGAAGAAAAGGGATCAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGCTCCAAGGAAGATACCATTTTTTGTGGTGTTTTTGATGGTCACGGACCTTATGGACACAAAGTTGCAAAGAAAGTTAGGGATTCTTTTCCTTTAAAGCTCAATGCCCAGTGGGATTTGCATCAGAAGAGTAGAGATGGACTCAGTGATCATAGCAGTGCCAACGGAAGTTATAAATCTGAAGGGAATGGATTTAGACTGGTGGAAGAGAAAACTAGCCCCACCACTGATCATGAACTTGACGAAACAGATATTACTTTTACATTGAGAGAATCTTTTCTGAAAGCTTGTAAGCTCATGGACAAAGAACTTAAAATGCATCCTGATATTGACTGCTTTTGTAGTGGGACTACAGCAGTTACCTTGGTCAAGCAAGGGCTGGACCTTGTTATTGGAAATATTGGGGACTCGAGAGCTATATTGGGTACTAGAGATCACGATGATTCTCTTATTGCTGTTCAGTTGACCATTGACCTGAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATTAGGCTTCGTAGAGGAAGGGTTTTTTCCCTTCAGAATGAACCTGAGGTGGCTCGAGTTTGGCTGCCTAACTCTGATTTCCCTGGTCTTGCTATGGCTCGGGCATTTGGAGACTTTTGCCTGAAAGACTTCGGATTGATTGCAGTTCCAGATATCTCATATCACCACCTTACAGAGAAGGATGAGTTTGTTGTGTTGGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTCGTGGACATTGTAGCATCTGCTCCACGGTCTACTGCTGCTAGGGCACTGGTTGAGTCAGCTGTTCAGGCATGGAGGGCAAAATATCCTTTTTGCAAGGTTGATGATTGTGCCGCGGTTTGCCTCTTCTTTGATTCAGATACAGATTTCAAGTCAAATGATACCAAAGGCAAGTTGGTATCGGAGGCATCTATTGACCAATCTGAGCATTTATCTTGA 1311 0.4516 MTQAVEVLNRYGTDMVGEPRGSDSECLAGFECFLNIVRALGMGSCISEVGAGGSSDPLLSDSNTDGKRRRLRGSSSFDFRVPGRMSSNGSSEVASMFCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHKVAKKVRDSFPLKLNAQWDLHQKSRDGLSDHSSANGSYKSEGNGFRLVEEKTSPTTDHELDETDITFTLRESFLKACKLMDKELKMHPDIDCFCSGTTAVTLVKQGLDLVIGNIGDSRAILGTRDHDDSLIAVQLTIDLKPNLPREEERIRLRRGRVFSLQNEPEVARVWLPNSDFPGLAMARAFGDFCLKDFGLIAVPDISYHHLTEKDEFVVLATDGIWDVLSNEEVVDIVASAPRSTAARALVESAVQAWRAKYPFCKVDDCAAVCLFFDSDTDFKSNDTKGKLVSEASIDQSEHLS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0185 436 MobiDBLite consensus disorder prediction 160 193 - -
Pvu8g0185 436 CDD PP2Cc 93 408 IPR001932 -
Pvu8g0185 436 PANTHER ALPHABET, ISOFORM E-RELATED 42 416 - -
Pvu8g0185 436 SUPERFAMILY PP2C-like 85 409 IPR036457 -
Pvu8g0185 436 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 416 - -
Pvu8g0185 436 Pfam Protein phosphatase 2C 105 386 IPR001932 -
Pvu8g0185 436 Gene3D - 84 410 IPR036457 -
Pvu8g0185 436 SMART PP2C_4 83 406 IPR001932 -
Pvu8g0185 436 ProSiteProfiles PPM-type phosphatase domain profile. 93 408 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0185 Pvu-Chr8 1545760 1550824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0185 61 409 PP2C-type Phosphatase Gene Family AT1G16220 59.777 4.93e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0185 - - gmx:100810538 795.038