Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0177 ATGATGACTTCTTCAGCCCCATCAAGAGGAAGAAGAACAAGAATGACTATTTTTCAGAGAGTTCTGAGTTTGATGATTTCAGTTTCATATTTGCTGACATGCTTAGGAAACAATGAGGTGCCTGCCCAGTTGAATGATGATGTTCTTGGCTTGATTGTGTTCAAATCAGACCTTCAAGACCCTTCTTCTCATCTTGCTTCGTGGAATGAAGACGATGTGAATCCATGTTCATGGCAGTTCGTGCAGTGCAATCCTGAGAGTGGAAGAGTTTCTGAGGTCTCATTGGATGGCTTGGGATTATCTGGGAAGATTGGAAGAGGGCTTGAGAAGTTGCAGCATCTCACGGTATTGTCCCTTTCTCATAACAACTTGAGTGGGGGTATTAGTCCTTCTCTTACTCTTTCCAACACTCTTCAGAGGCTGAACCTTAGTCACAATGCTCTCTCTGGTTCAATTCCTACTTCTTTTGTGAATATGAATTCAATAAAGTTTCTTGATCTTTCAGAGAATTCATTCTCGGGATCAATCCCTGAGACTTTTTTTGACACTTGTTCTTCCCTTCATCACATTTCTCTGGCTAGGAACATGTTTGATGGGCCGGTTCCTGGCTCACTGTCTAGATGTTCCTCGTTGAACAACCTTAATCTTTCCAATAACCATTTATCTGGTAATGTGGACTTTAATGGGATTTGGTCACTGACCAGGCTTAGAACTTTGGATCTATCCAACAATGCCTTATCTGGGTCTTTACCTAGTGGAATTTCATCCATACATAACTTGAAGGAGATCTTATTACAAGGTAACCAGTTTTCAGGTCCTTTATCCACTGATATTGGATTCTGCCTGCATCTAAGTAGGTTGGATTTTAGTGATAACCAGTTCAGTGGAGAACTACCTGATTCACTTGGAAGGCTTAGTTCTTTGAGCTATTTCAAGGCATCAAATAATTTTTTCACCAGCAAATTCCCTCCATGGATTGGTAACCTTACAAGTCTGGAGTACCTAGAGCTTTCAAACAATCAGTTCACTGGAAGCATTCCAGAGTCAATAGGGGAACTGGGATCACTCTCTCATCTCAGCATTTCAAGCAACAAGCTTGTTGGAACTATTCCATCATCATTGAGTTCCTGCACAAAGTTATCTGTGATCCAGTTCAGAGGCAATGGTTTCAGTGGCACCATTCCAGAGGGTTTGTTTGGCCTAGGATTGGAGGAAATTGACTTGTCCCGAAATGAACTGAGTGGTTCAGTTCCAGCAGGATCAAGCAGGCTCTTGGAAACTCTAACCAACTTGGATCTTTCAGATAACCATCTCCAAGGGAATATCCCTGCAGAAACTGGTCTTCTTTCAAAACTAAGTTACTTGAATCTGTCTTGGAATGATCTTCAATCACAGATGCCTCCAGAGTTTGGTCTCCTTCAGAATCTAGCAGTTTTGGATATTCGCAACAGTGCCTTGCATGGTTCAGTTCCAGCAGATATATGTGACTCGGGCAATTTAGCTGTTCTCCAACTAGATGAAAATTCATTGCAAGGAAATATTCCAGAAGGGATTGGGAACTGTAGCTCTCTTTACTTGCTGAGTTTGTCTCACAATAACTTGACTGGTTCAATTCCAAAGTCCATGTCAAAGCTAAACAAGCTGAAAATCCTGAAACTGGAATCCAATGAGCTAAGTGGAGAGATACCAATGGAGCTTGGAATGCTTCAGAGTCTACTTGCTGTGAACATATCATACAACAGGCTCACAGGAAGGCTTCCCACAGGTAGCATATTTCAGAACTTGGACAAAAGTTCCTTAGAAGGAAACCTGGGTCTATGCTCACCCTTGTTGGAGGGTCCTTGTAAAATGAATGTCCCCAAGCCACTAGTGCTTGACCCAAATGCCTACAACAACCAAATAAGCCCTCAAAGGCAGAGAAACGAATCATCAGAGTCTGAACCGGTCCACCGCCACAGGTTCCTTAGTGTATCTGCTATTGTAGCAATATCTGCATCCTTTGTGATTGTATTAGGAGTGATTGCTGTTAGCCTACTTAATGTTTCTGTGAGGAGAAGGCTATCATTTGTGGATAATGCTTTGGAAAGCATGTGCTCAAGCTCTTCAAGATCAGGGAGTCCAGCCACAGGAAAGCTGATTCTGTTTGATTCCCAGTCCTCACCTGATTGGATCAGCAGTCCTGAGTCCTTGCTCAACAAGGCATCAGAGATTGGAGAAGGAGTGTTTGGAACCCTCTACAAGGTTCCATTGGGATCACAGGGTAGAATGGTAGCAATCAAGAAGCTTATATCCACCAACATAATCCAATATCCAGAAGACTTTGATAAGGAGGTTAGGATCCTAGGGAAAGCAAGGCACCCAAATCTAATAGCATTGAAAGGGTACTATTGGACTCCTCAATTACAGCTTTTAGTAACTGAGTTTGCACCAAATGGTAGCTTGCAGGCCAAGCTACATGAGAGGCTTCCCTCAAGTCCACCTCTTTCTTGGCCTATAAGGTTCAAAATTTTGCTTGGGACAGCAAAGGGGCTTGCTCATTTGCACCATTCTTTCCGTCCACCAATCATCCACTACAACATAAAGCCAAGTAACATTCTTCTTGACGAAAATTGCAACCCCAAGATCTCGGATTTCGGGTTAGCTAGGCTTCTGACAAAGCTGGACAGGCATGTGATGAGCAATAGGTTTCAGAGTGCATTAGGATATGTGGCACCAGAGTTGGCATGTCAGAGCCTAAGGGTGAATGAGAAATGTGATGTTTATGGTTTTGGGGTGATGATTCTTGAGCTGGTGACAGGTAGGAGGCCAGTGGAGTATGGTGAAGACAATGTGCTTATACTGAATGACCATGTGAGAGTGCTGCTTGAGCAAGGTAATGTGTTGGAGTGTGTGGATCATAGTATGATAGAGTACCCAGAGGATGAGGTATTGCCTGTTCTAAAGCTAGCAATGGTATGCACCTCACAAATTCCTTCAAGCAGGCCAACTATGTCTGAAGTGGTGCAAATACTGCAGGTCATTAAAACCCCAGTTCCTCAAAGGATGGAAGTGTTTTGA 3057 0.4305 MMTSSAPSRGRRTRMTIFQRVLSLMISVSYLLTCLGNNEVPAQLNDDVLGLIVFKSDLQDPSSHLASWNEDDVNPCSWQFVQCNPESGRVSEVSLDGLGLSGKIGRGLEKLQHLTVLSLSHNNLSGGISPSLTLSNTLQRLNLSHNALSGSIPTSFVNMNSIKFLDLSENSFSGSIPETFFDTCSSLHHISLARNMFDGPVPGSLSRCSSLNNLNLSNNHLSGNVDFNGIWSLTRLRTLDLSNNALSGSLPSGISSIHNLKEILLQGNQFSGPLSTDIGFCLHLSRLDFSDNQFSGELPDSLGRLSSLSYFKASNNFFTSKFPPWIGNLTSLEYLELSNNQFTGSIPESIGELGSLSHLSISSNKLVGTIPSSLSSCTKLSVIQFRGNGFSGTIPEGLFGLGLEEIDLSRNELSGSVPAGSSRLLETLTNLDLSDNHLQGNIPAETGLLSKLSYLNLSWNDLQSQMPPEFGLLQNLAVLDIRNSALHGSVPADICDSGNLAVLQLDENSLQGNIPEGIGNCSSLYLLSLSHNNLTGSIPKSMSKLNKLKILKLESNELSGEIPMELGMLQSLLAVNISYNRLTGRLPTGSIFQNLDKSSLEGNLGLCSPLLEGPCKMNVPKPLVLDPNAYNNQISPQRQRNESSESEPVHRHRFLSVSAIVAISASFVIVLGVIAVSLLNVSVRRRLSFVDNALESMCSSSSRSGSPATGKLILFDSQSSPDWISSPESLLNKASEIGEGVFGTLYKVPLGSQGRMVAIKKLISTNIIQYPEDFDKEVRILGKARHPNLIALKGYYWTPQLQLLVTEFAPNGSLQAKLHERLPSSPPLSWPIRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENCNPKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLECVDHSMIEYPEDEVLPVLKLAMVCTSQIPSSRPTMSEVVQILQVIKTPVPQRMEVF* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0177 1018 PANTHER BNAA09G02190D PROTEIN 18 1016 - -
Pvu8g0177 1018 SUPERFAMILY L domain-like 60 398 - -
Pvu8g0177 1018 PRINTS Leucine-rich repeat signature 236 249 - -
Pvu8g0177 1018 PRINTS Leucine-rich repeat signature 425 438 - -
Pvu8g0177 1018 ProSitePatterns Protein kinases ATP-binding region signature. 737 761 IPR017441 GO:0005524
Pvu8g0177 1018 SMART LRR_typ_2 353 377 IPR003591 -
Pvu8g0177 1018 SMART LRR_typ_2 449 472 IPR003591 -
Pvu8g0177 1018 SMART LRR_typ_2 111 135 IPR003591 -
Pvu8g0177 1018 SMART LRR_typ_2 159 183 IPR003591 -
Pvu8g0177 1018 SMART LRR_typ_2 233 257 IPR003591 -
Pvu8g0177 1018 SMART LRR_typ_2 329 351 IPR003591 -
Pvu8g0177 1018 SMART LRR_sd22_2 329 355 - -
Pvu8g0177 1018 SMART LRR_sd22_2 233 262 - -
Pvu8g0177 1018 SMART LRR_sd22_2 425 457 - -
Pvu8g0177 1018 SMART LRR_sd22_2 111 130 - -
Pvu8g0177 1018 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 18 1016 - -
Pvu8g0177 1018 Pfam Leucine rich repeat N-terminal domain 45 84 IPR013210 -
Pvu8g0177 1018 Pfam Leucine rich repeat 113 171 IPR001611 GO:0005515
Pvu8g0177 1018 Pfam Leucine rich repeat 314 366 IPR001611 GO:0005515
Pvu8g0177 1018 Pfam Leucine rich repeat 499 558 IPR001611 GO:0005515
Pvu8g0177 1018 Gene3D Ribonuclease Inhibitor 202 326 IPR032675 -
Pvu8g0177 1018 ProSiteProfiles Leucine-rich repeat profile. 427 449 IPR001611 GO:0005515
Pvu8g0177 1018 Gene3D Ribonuclease Inhibitor 47 201 IPR032675 -
Pvu8g0177 1018 Gene3D Phosphorylase Kinase; domain 1 731 812 - -
Pvu8g0177 1018 Gene3D Ribonuclease Inhibitor 331 618 IPR032675 -
Pvu8g0177 1018 Gene3D Transferase(Phosphotransferase) domain 1 813 1015 - -
Pvu8g0177 1018 CDD STKc_IRAK 737 1005 - -
Pvu8g0177 1018 SUPERFAMILY Protein kinase-like (PK-like) 734 1012 IPR011009 -
Pvu8g0177 1018 SUPERFAMILY L domain-like 327 600 - -
Pvu8g0177 1018 Pfam Protein kinase domain 733 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0177 1018 ProSiteProfiles Protein kinase domain profile. 731 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0177 Pvu-Chr8 1480290 1484104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0177 9 1015 Receptor kinase-like Gene Family AT3G28040 62.635 0.0 1243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Pvu8g0177 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0177 - - pvu:PHAVU_008G017400g 1958.73