Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0175 ATGGATTCTTCTTCTGCTTCGATCTCTCACTTCCGACTCTCTGCGAATTCGTTCCTCTCTCGATACGAGCCGCTTGCTCTGCTTCTCGTTCCTCTCCTCTCTCTCCTCATCGCTCACTCGCTTCGCTCCTTCTTACGCCGTCTCTCCGAGAAAGGACTCAAAGCCACGCTCCTAGGGTTTATCATGAACGCCGTCAAATTGGTTCCTGGCGTGAAGCGGTACATAGACGCCGAAAAACAGAAGGTTGTGGATAAGTTGCAATCTGATAGCCAATCTAAAAGAGTAGGTTGGAATACTGAGTTGCCAAGCACAGGATTAGGGACGTCTGTCCTTGAGAAAATGAGAGAGGAAAAAAATAATGATCCGGTCTGGCAAGGCAAATGCTCCGGTACAGTCTACATTGGAGGAAGTGAATCTGATGGACATTTTTCTGTGATAAATGAGGCATGTTCAATGTTTGCACATACCAATCCCCTGCATTTGGATGTATTCAAGAGTGTTGCTCGCTTTGAAGCAGAGGTGGTTGCAATGACAGCGGCACTTCTTGGAAGTAAGGAAATTAGTTCTGGAGGACAAATATGTGGCAACATGACATCAGGCGGGACTGAAAGTATATTATTAGCTGTCAAATCATCTCGTGACTATATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATTATTCCCTTGTCTGGACACTCAGCATATGACAAGGCCGCACAGTATTTTAATATCAAACTATGGCGTGCACCAGTTGACAAGAATTTTAAAGCAGATGTGAAAGCGATTCGACGCCATATCAACAAAAATACCATCTTGATTGTTGGATCTGCTCCTGGGTTTCCTCATGGAATAATTGACCCCATCGAAGAACTTGGTCATCTGGCATCAAGCTTTGGTATTTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCATTTGCTCGTGAGCTTGGGTACCCCATTCCACCTTTCGATTTTTCTGTTAAAGGGGTTTCTTCAATATCAGTGGATGTACATAAATATGGTTTAGCTCCCAAAGGAACAAGTGTAGTTCTTTATAGAAACCATGAAATCAGAAAGAATCAATTTGTTGCCGTTACTGAGTGGTCTGGTGGGTTGTATGTGTCTCCAACCATAGCTGGAAGCAGGCCAGGAAGTCTAATTGCGGGTGCGTGGGCAGCAATGATTTCTCTGGGGAAAGAAGGTTACTTGAAAAATACAAAAGCAATTATGGAAGGGTCAAGAAGAATACGGAAAGGCATAGAGGAGATTGCTGAGTTGTTTATTGTTGGAAAACCCGACATGACAATCGTGGCTTTGGGATCTGATGTTGTGGATATATTTGAAGTCAATGATGTTATGTCATCCAAAGGGTGGCATTTGAATGCATTACAGAGACCAAATAGCATCCACATCTGTGTTACACTACAACATGTTCCAATTGTTGAAGACTTTCTCAATGATTTGAAGGAATCTGTGAAAACTGTGAAAGAAAATCCAGGTCCAATAAGTGGAGGGCTAGCACCTATATATGGAGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTATATGGATGGTACCTGCTAA 1620 0.4321 MDSSSASISHFRLSANSFLSRYEPLALLLVPLLSLLIAHSLRSFLRRLSEKGLKATLLGFIMNAVKLVPGVKRYIDAEKQKVVDKLQSDSQSKRVGWNTELPSTGLGTSVLEKMREEKNNDPVWQGKCSGTVYIGGSESDGHFSVINEACSMFAHTNPLHLDVFKSVARFEAEVVAMTAALLGSKEISSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPLSGHSAYDKAAQYFNIKLWRAPVDKNFKADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGHLASSFGICFHVDLCLGGFVLPFARELGYPIPPFDFSVKGVSSISVDVHKYGLAPKGTSVVLYRNHEIRKNQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMISLGKEGYLKNTKAIMEGSRRIRKGIEEIAELFIVGKPDMTIVALGSDVVDIFEVNDVMSSKGWHLNALQRPNSIHICVTLQHVPIVEDFLNDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDYMDGTC* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0175 539 PANTHER - 20 539 - -
Pvu8g0175 539 Pfam Pyridoxal-dependent decarboxylase conserved domain 167 443 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pvu8g0175 539 Gene3D - 136 403 IPR015421 GO:0003824
Pvu8g0175 539 Gene3D Aspartate Aminotransferase, domain 1 108 502 IPR015422 GO:0003824
Pvu8g0175 539 SUPERFAMILY PLP-dependent transferases 75 502 IPR015424 -
Pvu8g0175 539 Gene3D - 99 536 - -
Pvu8g0175 539 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 20 539 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0175 157 499 Calmodulin-binding Proteins AT3G17760 26.575 1.32e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0175 K01634 - gmx:100794743 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0175 8 1459744 1466135 Pvu8g0175 8 1459744 1466135 ECH