Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0156 ATGGTGGGGAACGACGACGCGGGTCACCTCTCCGCCTCCCGGAAAATGTTCTGGAGGTCGGCGTCGTGGTCCTCCTCGCGCACCGCCGCCGGGAACGCTTCTTCCGGGGAGGCGGGTAAGGGTTTCGCGGATTCTGGCAGCGTTGAAGGCTCACATGGACAGAACCGGCGGTTCCCTCCGCCGCCACTGACGCCTCGTTCGCAGCAGAATTGTAAGGCGCGGTCGTGTCTGCCGCCGCTGCAGCCGCTGTCCATCGCCCGGCGGAGTCTTGATGAGTGGCCGAAGGCGGGGTCTGATGACATCGGCGAGTGGCCGCAGCCGCCCACCACCCCCGGCGGGAGAGGTAATGGTAGCAATGGTGAGAGGTTGAAACTTGATTTGTCTTCCATTCAGCATAACAACCCTGATCATGGTAGGAGTAACAATGGTGGGCTTGTGAAGAGGGATAAGATTGCATTTTTTGACAAGGAGTGTTCAAAAGTTGCTGATCATGTGTACCTTGGTGGTGATGCTGTTGCTAGGGATAGGGACATTTTGAAGCATAATGGTATCACTCATGTGTTGAATTGTGTGGGGTTTGTGTGTCCTGAGTACTTTAAGGCTGATTTTGTGTACAGGACTTTGTGGCTGCAGGACAGTCCCTCTGAGGACATTACTAGTATCTTGTATGATGTGTTTGACTACTTTGAGGATGTTAGGGAACAAGGTGGGAGGGTTTTTGTGCACTGTTGCCAAGGGGTCTCTAGGTCTACATCTCTGGTAATTGCTTACCTTATGTGGAGGGAAGGCCAAAGTTTTGATGATGCTTTTCAGTTTGTGAAGGCTGCAAGAGGGATTGCTGATCCCAACATGGGGTTCGCTTGCCAGTTGTTGCAGTGCCAGAAAAGGGTCCACGCCTTCCCTCTTAGTCCTAGCTCTTTGCTGAGGATTTACAGGATTGCTCCACACTCCCCTTATGATCCTCTTCATCTTGTTCCCAAAATGTTGATGGATCCTTCTTCAGCTGCATTGGACTCCAGAGGCGCGTTTATTGTGCACATTCCTTCTGCAATATATGTTTGGATTGGTAAGAATTGTGAGGCCATCATGGAGAGGGATGCCAGAGGGGCTGTTGGCCAGATTGTTCGGTATGAGAAGGTGCAAGGGCCAATTGTGATGATCAAGGAAGGTGAGGAACCAGCTTACTTCTGGGATGCTTTTTCTAATTTTCTGCCCTTGATGGATAAATCTGGCAATAGGGTAGAAGATAGAAATTTGAGTAGTAAAGTTTTGCCTGATGAGAGGAGAGTGGAAGCTTATGATGTTGATTATGAAGTTTTCAAGAAAGCAATAATGGGAGGATTTGTGCCTCCCTTTGCCTCATCGGAGAATGAACATGAAACCCATCTGCCTGCAAGAGAGAGTAGTTGGAGTGCTTTAAGGCGTAAAGTTGCCTCTGCTAATATGAAGGAGTTTGTCTCCACCCCTAAGTTATCCTTTCCCAGGGTTTATTCAGACTCCATGTTGTGTATTCACACATCAGCAAACCTGTCTCCATCCTCATCCCTTTCATCATCCTCATCATCCATATCATCATCCTCTTCACCCTCTTTTGTTTCTCCGGACTCCATTTCTTCTGATTCCAGCACTCATTCTAAGTTTTTGTCAGAAGTGTCCCCAGATTCTTCCTCCTTGGTTTTGACTCCTGTTCCCGTATCTTCTTCTTTGTCTAGTTTTTCTAATTTGTCAATCTCTTCAAATTCTACTTCTAAAACAGTTTCTAACAGTACAGATATCCTTGGTGTCAAGTTATCACATCCCTGGTCTCAGTCAGCCTCTTTACCATTGAAAAAACCATCAACTTCCCTTGCTGAACGCAGAGGTAGTTTGTCAAAATCTTTGAAGTTGCCACTTAGGAATGATAAGAAACAAGTGATGGATAAGCCATCATCGACCTTTGATAATAGTCAAGAATATGACATTGTTGGTAATGGCAATGTTAGCTATTTGCAACTATCAGACAGTAAAGATAATTTTTGTGAGTCTAACAACCATGCCAAGGATGGAAGTGTGGATTCATTTCAAAAGTGTGAGCTGGCATTATGTCCAAGCACTGTTGACAGCACTCACCTCAAGGAATCATCACTTGTCCGGAACTCTGTTGAGCCTTTGATAGATAGTTCCTCAGTAGAAGACGCATTGCTTGGTCAGTCTGCAGCATTGGAGGGAACTAATGAGAGTGGCTTACAGCAGTTTAATGTGGCACAGACTTCGGTATATCACTGGCCCAGTTTAGAAAAGATTGAGACATTTGGTACAGGTCATTTGGATTCTAAAGCTGCTTTTGTCATATTCTCTCCGGGTACGCATGTACATGCAGGGAACATGTTATACATTTGGGTAGGGAGGTCTTTCAATTGTGAAGCTTCACAGGTTCACTTGGATATTGATAAACAGTTAGATTGTTTAGGAGCTGTTGACTGGAATCAAATTGGTTGTGATCTCCTTGTTCGGTTCAGTTTGCCAAAGAATACAGTCTTCAAGATCGTTAAAGAGAATGAGGAATCATCTGAGTTTCTTGCTTTGCTCAGTTCATTGTAG 2580 0.4593 MVGNDDAGHLSASRKMFWRSASWSSSRTAAGNASSGEAGKGFADSGSVEGSHGQNRRFPPPPLTPRSQQNCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTTPGGRGNGSNGERLKLDLSSIQHNNPDHGRSNNGGLVKRDKIAFFDKECSKVADHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRIYRIAPHSPYDPLHLVPKMLMDPSSAALDSRGAFIVHIPSAIYVWIGKNCEAIMERDARGAVGQIVRYEKVQGPIVMIKEGEEPAYFWDAFSNFLPLMDKSGNRVEDRNLSSKVLPDERRVEAYDVDYEVFKKAIMGGFVPPFASSENEHETHLPARESSWSALRRKVASANMKEFVSTPKLSFPRVYSDSMLCIHTSANLSPSSSLSSSSSSISSSSSPSFVSPDSISSDSSTHSKFLSEVSPDSSSLVLTPVPVSSSLSSFSNLSISSNSTSKTVSNSTDILGVKLSHPWSQSASLPLKKPSTSLAERRGSLSKSLKLPLRNDKKQVMDKPSSTFDNSQEYDIVGNGNVSYLQLSDSKDNFCESNNHAKDGSVDSFQKCELALCPSTVDSTHLKESSLVRNSVEPLIDSSSVEDALLGQSAALEGTNESGLQQFNVAQTSVYHWPSLEKIETFGTGHLDSKAAFVIFSPGTHVHAGNMLYIWVGRSFNCEASQVHLDIDKQLDCLGAVDWNQIGCDLLVRFSLPKNTVFKIVKENEESSEFLALLSSL* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0156 859 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 298 IPR029021 -
Pvu8g0156 859 Gene3D Protein tyrosine phosphatase superfamily 142 299 IPR029021 -
Pvu8g0156 859 MobiDBLite consensus disorder prediction 514 535 - -
Pvu8g0156 859 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 852 - -
Pvu8g0156 859 SUPERFAMILY Actin depolymerizing proteins 305 407 - -
Pvu8g0156 859 MobiDBLite consensus disorder prediction 603 621 - -
Pvu8g0156 859 MobiDBLite consensus disorder prediction 603 623 - -
Pvu8g0156 859 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 216 277 IPR000387 GO:0016311|GO:0016791
Pvu8g0156 859 ProSiteProfiles Dual specificity protein phosphatase domain profile. 157 299 IPR020422 GO:0006470|GO:0008138
Pvu8g0156 859 SMART dsp_5 157 296 IPR020422 GO:0006470|GO:0008138
Pvu8g0156 859 MobiDBLite consensus disorder prediction 94 122 - -
Pvu8g0156 859 PANTHER MKPA PROTEIN 1 852 - -
Pvu8g0156 859 ProSitePatterns Tyrosine specific protein phosphatases active site. 241 251 IPR016130 GO:0016311|GO:0016791
Pvu8g0156 859 MobiDBLite consensus disorder prediction 21 78 - -
Pvu8g0156 859 Pfam Dual specificity phosphatase, catalytic domain 165 295 IPR000340 GO:0008138|GO:0016311
Pvu8g0156 859 Gene3D Severin 320 404 IPR029006 -
Pvu8g0156 859 CDD DSP 158 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0156 Pvu-Chr8 1324389 1329573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0156 2 193 Protein tyrosine phosphatase (PTP) family AT3G55270 61.458 7.30e-66 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0156 - - gmx:100777406 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0156 8 1324389 1329573 Pvu8g0156 8 1324389 1329573 ECH