Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0155 ATGGCTCCTACTAAGGTGGTGAATCCTAAAAAGGCTGATCCCAAAGCTCAGGCCTTGAAGACAGCTAAGGCTGTCAAATCAGGTGGCCAGGTGTCTAAGAAGAAAACTAAAAAGATCAGGACATCTGTTACTTTTCACCGGCCCAAGACATTGAAGAAGGACAGAAATCCTAAGTATCCTCGTATTAGTGCTCCACCTAGAAACAAGTTGGACCATTATCAGATACTTAAATTTCCTCTAACTACCGAATCTGCAATGAAGAAAATTGAGGATAACAATACACTGGTTTTTATTGTTGATCTCCGGGCCGACAAAAAGAAGATTAAAGATGCTGTGAAGAAGATGTATGACATTCAGGCCAAGAAAGTAAATACTTTAATCAGGCCAGACGGAACTAAGAAAGCCTATGTTAGGTTGACTCCAGATTATGATGCCTTGGATGTAGCCAACAAGATTGGTATCATCTAA 468 0.4038 MAPTKVVNPKKADPKAQALKTAKAVKSGGQVSKKKTKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0155 155 Pfam Ribosomal protein L23, N-terminal domain 15 65 IPR005633 -
Pvu8g0155 155 MobiDBLite consensus disorder prediction 1 41 - -
Pvu8g0155 155 Hamap 50S ribosomal protein L23 [rplW]. 75 155 IPR013025 GO:0003735|GO:0005840|GO:0006412
Pvu8g0155 155 TIGRFAM uL23_arch: ribosomal protein uL23 79 155 IPR019985 GO:0003735|GO:0005840|GO:0006412
Pvu8g0155 155 Gene3D - 36 155 IPR012677 -
Pvu8g0155 155 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 1 155 - -
Pvu8g0155 155 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 72 148 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pvu8g0155 155 ProSitePatterns Ribosomal protein L23 signature. 133 148 IPR001014 -
Pvu8g0155 155 Pfam Ribosomal protein L23 75 137 IPR013025 GO:0003735|GO:0005840|GO:0006412
Pvu8g0155 155 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 155 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0155 Pvu-Chr8 1320997 1322647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0155 28 155 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 89.062 1.41e-66 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0155 K02893 - gmx:100777933 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0155 8 1320997 1322647 Pvu8g0155 8 1320997 1322647 ECH