Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0153 ATGATGATATCGAGAGGATTGTTCGGGTGGTCCCCGCCGCACGTGCAACCGCTCACGCCGGTTTCGGAGGTGTCGGAGCCGCCGGAGTCGCCGTCGCCGTACCTGGACCCCGGCGCCGAGACTTCGGCGTCGCAGCAGGTGGAGATGGAGGAGGAAATGGAGGAGGTGGAGGAGATCGAACCGCCGCCGGCTGCGGTTCCGTTCTCGCAGCTCTTCGCGTGCGCCGACCGCTTCGATTGGTTCCTCATGACCGTCGGTTCCCTTGCCGCCGCGGCTCATGGCACCGCGCTCGTCATTTACTTGCACTATTTCGCGAAGATCATTCACGTGCTACGGATGGATCCTGAGCCCGGCACGACATCACACGACCAGTTCCACAGGTTCACCGAGCTTGCTTTAACAATTGTTTATATTGCTGCGGGAGTTTTCGTTGCTGGTTGGATTGAGGTTTCATGTTGGATCTTGACGGGAGAACGGCAGACTGCTGTCATCAGGTCAAATTATGTTCAAGTACTGCTTAATCAAGATATGAGTTTTTTTGATACTTATGGGAACAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGTTGCTTATCCAGTCTGCTCTTAGTGAAAAAGTTGGAAATTATATTCATAATATGGCCACATTCTTCAGTGGTCTTGTCATTGGCCTTATCAATTGTTGGCAGATTGCTTTGATAACATTAGCGACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAACATATTCCTCCATAGGCTTGCAGAGAATATCCAAGATGCATATGCTGAAGCAGCTGGGATTGCTGAACAGGCAGTTTCCTATATAAGGACATTGTATGCATTTACAAATGAAACTTTGGCCAAGTATTCATATGCAACATCATTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGTCTGGGTCTTGGATTTACATATGGTCTAGCAATATGTTCTTGTGCGTTACAACTCTGGGTTGGAAGATTCTTGGTTATTCATGGAAAAGCGCATGGTGGTGAAATTATAACAGCTCTTTTTGCTGTAATTCTAAGTGGCCTGGGATTGAATCAAGCAGCGACAAATTTCTACTCATTTGATCAGGGACGGATAGCTGCTTATAGATTATTTGAGATGATAAGTCGATCACCCTCATCTGTTAATCATGATGGCACAGCCCCTGATTCAGTGCAAGGAAATATAGAATTTCGGAATGTTTATTTCAGCTATCTTTCCCGTCCTGAAATCCCTATCTTGAGTGGATTTTATCTCACTGTGCCTGCTAAGAAAGCTGTAGCACTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCTCTCATGGAGCGTTTTTATGATCCTACATTAGGAGAAGTTCTTTTAGACGGTGAAAACATCAAGAATTTGAAACTGGAAATGCTGAGGAGCCAAATAGGATTAGTCACCCAGGAGCCTGCTTTACTCAGTTTGAGTATAAGAGACAACATTGCTTATGGTAGGGATGCTTCAATGGATCAAATTGAAGAGGCGGCTAAAATTGCTCAAGCACATACATTTATCAGCTCATTAGAGAAAGGTTATGACACACAGGTTGGCAGGGCTGGTCTAGCTTTGACCGAAGAGCAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGGCTGTTCAAGGGGCTCTGGATTTGCTTATGTTGGGACGCTCAACGATAATAATTGCTCGTAGGCTTAGTCTCATAAGGAATGCTGACTATATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCACGATGAATTATTAACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGCGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAAACTGCAGGCTTTCAAATTGAAAAAGATTCTTCAAGTCATAGCTTAAAAGAACCATCTTCCCCTAAAATGACAAAGTCACCCTCTCTTCAAAGAATGTCTAATGTATCTCGACCTCCAGATGGTATCTTTAACTTGCCAGAATCACCAAAAGTCCGGAGCCCACCACCTGAGAATATGCTGGATAATGGTCAGCTATGGGATGCAGCAGATAAGGAGCCATCAATAAGAAGGCAGGACAGTTTTGAAATGAGACTTCCGGAGTTACCGAAGATTGATGTTCAGCCTGTGCAGAGACAAATGTCAAATGAATCTGATCCTGAATCTCCAGTTTCACCTCTTTTAACATCTGATCCTAAAAGTGAACGCTCCCATTCACAGACTTTTAGTAGACCACATAGTCATTCTGATGATGTTTCAGTTAAAATGAGACAAACAAAGGGTACACGGCACCAAAAGCCACCATCACTGCAGAAGCTGGCCGAGCTTAGTTTTACTGAGTGGCTTTACGCTGTGTTAGGAAGCATAGGTGCTGCAATCTTTGGCTCTTTCAACCCTCTTCTTGCTTATGTTATTGGTCTTGTGGTGACAGCTTACTATAGAATTGATGACACTCATCACCTACAACGGGAAGTAGACAAGTGGTGCTTGATCATTGCCTGCATGGGTATTGTGACGGTAGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACGGAAAGAGTTAGGAGGATGATGTTCTCAGCCATGCTACGCAATGAAGTGGGATGGTTTGATGGTGAGGAGAACAGTGCTGACAATTTGTCCATGCGATTGGCAAATGATGCTACTTTTGTGCGAGCTGCTTTTAGCAACAGGCTTTCTATATTTATACAGGACAGTGCTGCAGTTATTGTTGGTCTTCTTATTGGTGCTTTGCTGCATTGGCGTTTAGCACTAGTGGCTTTTGCAACCCTTCCAATTCTCTGTGTTTCTGCCATTGCCCAGAAATTTTGGCTTGCTGGATTTTCAAGAGGTATCCAGGAAATGCACAGAAAGGCATCTTTGGTCCTTGAAGATGCAGTTAGGAACATTTACACTGTTGTTGCTTTCTGTGCTGGTAATAAGGTAATGGAGCTGTATAGGCTGCAATTGAAGAAAATATTTAAGCAGAGCTTTCTACATGGGATGGCAATTGGTTTTGCGTTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTGCTACTTTGGTACACTGCAATATGTATAAAGCGAGGTTACATGGATCCACCCACTGCACTCAAAGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCTTTTGGATTGGCTCCTTACATACTAAAACGACGAAAATCCCTCATATCAGTGTTTGAAATTATTGACCGTGTTCCTAAGATTGACCCTGATGATGGCTCAGCATTGAAGCCATCCAATGTATATGGAAGCATTGAGTTAAAAAATGTTGATTTTTGTTACCCATCTCGTCCTGAAGTGTTGGTATTGAGCAATTTTGGCCTCAAAGTCAATGGGGGCCAAACAGTTGCTATTGTGGGAGTTTCAGGATCAGGAAAGAGCACTATCATATCTTTGATTGAGAGATTTTATGATCCAGTTGCAGGCCAAGTTTTCCTGGATGGTAGGGATTTAAAGCTCTATAACTTGAGATGGTTGAGGAGCCACCTAGGTCTTGTTCAGCAGGAACCTATTATCTTTTCAACAACAATAAGGGAAAACATTTTATATGCACGGCATAATGCTACTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCAAATGCCCATCATTTCATTAGCAGCTTGCCTCATGGTTATGACACCCATGTTGGGATGAGAGACGTTGACTTAACCCCAGGACAGAAACAGAGAATTGCAATTGCTAGGGTAGTGCTGAAAAACGCCCCTATCTTATTGTTGGATGAAGCTAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACGCTAATAATGGGAAACAAGACCACTATTTTAATAGCACACAGGGCTGCAATGATGAGGCATGTAGACAATATTGTAGTGCTTAATGGTGGACGGATAGTCGAGGAAGGCAGTCATGATTCATTGGTCGCAAAGAATGGTTTGTATGTCCGATTGATGCAACCTCATTTTGGTAAGACTTTGCGTCACCATCGACTTGTTTAG 4212 0.4342 MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYLDPGAETSASQQVEMEEEMEEVEEIEPPPAAVPFSQLFACADRFDWFLMTVGSLAAAAHGTALVIYLHYFAKIIHVLRMDPEPGTTSHDQFHRFTELALTIVYIAAGVFVAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAAGIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSPSSVNHDGTAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEMLRSQIGLVTQEPALLSLSIRDNIAYGRDASMDQIEEAAKIAQAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQGALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAGFQIEKDSSSHSLKEPSSPKMTKSPSLQRMSNVSRPPDGIFNLPESPKVRSPPPENMLDNGQLWDAADKEPSIRRQDSFEMRLPELPKIDVQPVQRQMSNESDPESPVSPLLTSDPKSERSHSQTFSRPHSHSDDVSVKMRQTKGTRHQKPPSLQKLAELSFTEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDDTHHLQREVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDGEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVGLLIGALLHWRLALVAFATLPILCVSAIAQKFWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTAICIKRGYMDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDGSALKPSNVYGSIELKNVDFCYPSRPEVLVLSNFGLKVNGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVFLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENILYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRDVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKTLRHHRLV* 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0153 1403 SUPERFAMILY ABC transporter transmembrane region 818 1139 IPR036640 GO:0005524|GO:0016021
Pvu8g0153 1403 Gene3D - 1152 1390 IPR027417 -
Pvu8g0153 1403 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1399 - -
Pvu8g0153 1403 Gene3D ABC transporter type 1, transmembrane domain 1006 1151 IPR036640 GO:0005524|GO:0016021
Pvu8g0153 1403 Gene3D ABC transporter type 1, transmembrane domain 770 996 IPR036640 GO:0005524|GO:0016021
Pvu8g0153 1403 MobiDBLite consensus disorder prediction 663 814 - -
Pvu8g0153 1403 CDD ABC_6TM_Pgp_ABCB1_D2_like 826 1137 - -
Pvu8g0153 1403 PANTHER ABC TRANSPORTER B FAMILY 19 1399 - -
Pvu8g0153 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1144 1390 IPR027417 -
Pvu8g0153 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 408 643 IPR003439 GO:0005524
Pvu8g0153 1403 MobiDBLite consensus disorder prediction 730 746 - -
Pvu8g0153 1403 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 642 IPR027417 -
Pvu8g0153 1403 MobiDBLite consensus disorder prediction 18 45 - -
Pvu8g0153 1403 Pfam ABC transporter transmembrane region 836 1100 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g0153 1403 Pfam ABC transporter transmembrane region 85 358 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g0153 1403 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 383 - -
Pvu8g0153 1403 Gene3D - 398 645 IPR027417 -
Pvu8g0153 1403 MobiDBLite consensus disorder prediction 783 804 - -
Pvu8g0153 1403 MobiDBLite consensus disorder prediction 676 697 - -
Pvu8g0153 1403 SMART AAA_5 435 614 IPR003593 -
Pvu8g0153 1403 SMART AAA_5 1181 1368 IPR003593 -
Pvu8g0153 1403 Coils Coil 39 59 - -
Pvu8g0153 1403 Pfam ABC transporter 429 573 IPR003439 GO:0005524
Pvu8g0153 1403 Pfam ABC transporter 1172 1320 IPR003439 GO:0005524
Pvu8g0153 1403 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1154 1391 IPR003439 GO:0005524
Pvu8g0153 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 831 1123 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu8g0153 1403 SUPERFAMILY ABC transporter transmembrane region 71 383 IPR036640 GO:0005524|GO:0016021
Pvu8g0153 1403 Gene3D ABC transporter type 1, transmembrane domain 70 655 IPR036640 GO:0005524|GO:0016021
Pvu8g0153 1403 MobiDBLite consensus disorder prediction 755 782 - -
Pvu8g0153 1403 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 85 375 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0153 Pvu-Chr8 1303115 1312724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0153 59 700 Calmodulin-binding Proteins AT2G36910 43.750 6.17e-164 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0153 K05658 - gmx:100779000 2560.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0153 8 1303115 1312724 Pvu8g0153 8 1303115 1312724 ECH
Pvu8g0153 8 1303115 1312724 Pvu4g0684 4 8759157 8765976 PCT