Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0148 ATGTCCTACCAACATAAAAGTTTTTGGATGCCACGGGATGCTGGCTGCATGGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAATTGAACCCAAGCGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATAGTCAGCAACAAGAAACAAGCAGTTGAAGATGTTAGTGGTAGGCCAATTTCGGGAGTTTCACATGTGAATGTTTCCCAATGGGACACCAGTTCAGGATTTCACTCTGTCATGGGTCAATTTTCTGACCGACTTTTTGGATCTGATCTTGCTAGGACTGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTTAGTGGAAATATGAACATGGGAAGGAAGGATTTTGAGCACCAATATGGTAATGATCCTTCGGTGGGATTGTCAATATCTCATTCCATTGCAGACCCATCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATTCTGACAATTGCATGCCTTCTGCAGCCATGGGGCACTCCTATAGCAGGGAAGATAATAGTACAATTTCAGTAGGTGCTGGCTACAACAAGAATGATGGCAATATTTCGTTGGGTCCTACTTATAACCATAGAAATGACAACACCATTGGTATGGGGTCTAGAATAAGTAGTAAGACTGATGACAATCTTCTTTCAGTGGCTCACAACTTCAATAAAGGGGATGGGGGCTTTATGTTGATGGGTCACAATTATGGCAAGGGAGATGAAAGTATCTTATCAATGGGTCAGCCCTTTGACAAGGGAGATGGGAATTTCATATCAATGGGTCAATCATATGAGAAAGAAGATGGGAATTTAATATCTCTGGGCACCTCATATTCCAAGGGGCATGAGAGCTTTATATCAATTGGCCCAACCTTTGGTAAATCAGGAGAGAATTTCATTACTGTTGCTCCTTATGACAAGGGTACCGATCATTTAATATCAATGGGTCCAACATATGATAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATATGACAGAGGAGATTCTAGTTCTTTACCCGTTGGTCAAAATCACCATAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCATGATGACCCTGAAGCAAATCCCTCTGGTGGAATCATTAGTGGCTATGATCTGTTGATAGGAAACCAGAACTCAGCTCAAGGTTTGGATAGTCAGAATGATTTGAGTGAAACAAACACTGAATCACTTGTAAATAGCATTCCAAAGCTCAATACTAAAAATGATACTGTTGTTAAGAACAAAGAGCCTAAGACAACAACCAAGAAGGCTCCTACGAACAACTTCCCTTCAAATGTCAAAAGTTTACTGTCAACCGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAATCATAAAAGGAACAGGGTATTTGTGTTCATGTGACGACTGCAAGCAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCCAATAATCACATATACTTTGAGAATGGAAAAACTATATATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAATATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATTTACGGAAAGGATGAAGTGATAATTCTGTCTTGA 1752 0.4001 MSYQHKSFWMPRDAGCMAEENVGYENSSRIEPKRSHQWFMDTGEPEIVSNKKQAVEDVSGRPISGVSHVNVSQWDTSSGFHSVMGQFSDRLFGSDLARTVNLVDKNVPSIVSGNMNMGRKDFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPSAAMGHSYSREDNSTISVGAGYNKNDGNISLGPTYNHRNDNTIGMGSRISSKTDDNLLSVAHNFNKGDGGFMLMGHNYGKGDESILSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYSKGHESFISIGPTFGKSGENFITVAPYDKGTDHLISMGPTYDKVDSNIASTVPSYDRGDSSSLPVGQNHHKGQSSTISFGGFHDDPEANPSGGIISGYDLLIGNQNSAQGLDSQNDLSETNTESLVNSIPKLNTKNDTVVKNKEPKTTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVIILS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0148 583 MobiDBLite consensus disorder prediction 340 376 - -
Pvu8g0148 583 SUPERFAMILY Porins 173 295 - -
Pvu8g0148 583 MobiDBLite consensus disorder prediction 398 420 - -
Pvu8g0148 583 PANTHER N-LYSINE METHYLTRANSFERASE 1 581 - -
Pvu8g0148 583 MobiDBLite consensus disorder prediction 340 368 - -
Pvu8g0148 583 PANTHER AUTOIMMUNE REGULATOR 1 581 - -
Pvu8g0148 583 Pfam Tify domain binding domain 476 531 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0148 Pvu-Chr8 1259806 1265860 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0148 438 564 PHD Transcription Factor Family AT3G53680 55.906 1.12e-40 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0148 - - gmx:100782217 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0148 8 1259806 1265860 Pvu8g0148 8 1259806 1265860 ECH
Pvu7g1631 7 38504639 38508100 Pvu8g0148 8 1259806 1265860 ECH