Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0143 ATGGTGAACGTCATGGAGTGGCAGAAGCAGCGTTGGCAACCCAACGGCAACGCCGAAATGATGTACGTCAAAGTCATGACCGACGAACAACTCGAGACTCTCCGCAAACAGATTGCGGTTTACGCAACAATCTGCGAACAACTCGTCGAGATGCACAAAACCATCTCTTCTCACCAAGATCTCGCAGGGATTAGACTGGGTAGTATGTACTGCGATCCTTTGTTGGGTTCTGGTGGGCACAAAATAGCTTCGAGACAGAGGTGGACTCCAACGGCTATGCAGCTTCAGATTTTGGAGCGGATATTTGATCAGGGAACTGGGACTCCCAGCAAGGAGAAGATCAAGGATATCACTGCTGAGCTCAGCCAGCATGGCCAGATTTCGGAGACTAATGTGTATAACTGGTTTCAGAACAGGAGGGCTCGTTCCAAAAGAAAGCAGCAGAATGTGGCATCTGGTGTTAATGCTGAATCAGAAGTAGAGACCGAGGTTGATTCCAAAGATAAGAAGACAAAGCCAGATGATTTTTGGTCCCAGCACAGTGTTTCTGCTGGGCCTTCTGATAGTTTAGGTTTCCAGAACCATGATGATCTGCAGTACTTGAATGAGAATCCAGAGTCCAACAAACCAGATTCTGTTTTCCCCTCTGATGGGAGTTTAAGATCCACCAGAAATTTCAACCATGTGCCTGTTTTTGATGGGCTGCTATCGAATCCCGGAAACGGCTATCTTACTGGAAAAATGGAAGCCACTGAGAACTACGACTTGTATCAGCCATCAGACGACTTCGACATGGCAGGCTGA 804 0.4751 MVNVMEWQKQRWQPNGNAEMMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTISSHQDLAGIRLGSMYCDPLLGSGGHKIASRQRWTPTAMQLQILERIFDQGTGTPSKEKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQQNVASGVNAESEVETEVDSKDKKTKPDDFWSQHSVSAGPSDSLGFQNHDDLQYLNENPESNKPDSVFPSDGSLRSTRNFNHVPVFDGLLSNPGNGYLTGKMEATENYDLYQPSDDFDMAG* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0143 267 MobiDBLite consensus disorder prediction 144 220 - -
Pvu8g0143 267 SMART HOX_1 83 150 IPR001356 GO:0003677
Pvu8g0143 267 MobiDBLite consensus disorder prediction 160 176 - -
Pvu8g0143 267 SUPERFAMILY Homeodomain-like 83 148 IPR009057 -
Pvu8g0143 267 Gene3D - 86 151 - -
Pvu8g0143 267 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 266 IPR044559 GO:0003700
Pvu8g0143 267 MobiDBLite consensus disorder prediction 177 220 - -
Pvu8g0143 267 Pfam Homeodomain 85 145 IPR001356 GO:0003677
Pvu8g0143 267 CDD homeodomain 85 147 IPR001356 GO:0003677
Pvu8g0143 267 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Pvu8g0143 267 PANTHER - 3 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0143 Pvu-Chr8 1228953 1234230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0143 4 267 Wox Gene Family AT4G35550 50.352 9.86e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pvu8g0143 Homeodomain 7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0143 - - gmx:100784355 475.707