Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0137 ATGGATAACTATGGATCATCTTCTCCATACGGGTATCCGAGCCCTTATGCATACCCTTCTGACCCTCGTCAACCATACCCTCCTCCTCCAGGTTCAGCTCCTGATCCATATGCACATCTTCCTTATCCTCCATATCCTTACCTTTCTTCACATTCCCTCAACTATTCTCACCATCCACCTCCTAGGCCTATGCATTCTGGCCATTTTGAGTATTCTTATCCTCCTTCTATGGACTTTCCTCACCCTCCTCCACCAGCTTATGCTCCTCCTCCCAGTTATCCTTATCCCTACCATGTGCCTCCACCAAATCATGGTTCTCCCAGGCCTCCCCTTCTTCACCATGCCAGTTTCCAACATGGATCGCCTCCATACTATTATCCACCAAAGGAGTCCTATTCGCCTCCTCCTGATATCCATTCCCACACCAATAGCTTCTCTGGTCCCTATTGGCAGGAGAACACAAGCACTGCTGCAGAAGGTAAAGTGTCACAAACTAGTCATAGTTCCAAGCCTTCTCAGGGTTCTTCTTACCCCCCTTTGGATGATCTTATGAACAATGTTAGGTTGTCTGATGATGGCAAGCCAACTGCTCCTGCATCACCTCCTGCGCCTGCAGGGCAACCGTTTATGCATTCCATTTCAGTTCCCAAGTTGCAACAGAAGAGAGAGGAGTTTTATGGATATTCTAATAACTCCTTCTCCGGGTGGGGATCCTCCTACCCCACTCGGATGGATTCTTTGAGGCTTTCAGATTTTTCTGGCTCGTTTAATGAATCAGTTTATGGTCAGAATTTGCAGATTGTTCCAGCGCAGAATAAAGGGTCCTTGAGAGTTTTGCTCCTCCATGGAAATTTAGATATATGGGTCCATGAAGCCAAGAATCTTCCAAACATGGACATGTTTCACAAAACTTTGGGGGATATGTTTGGTAAATTGCCTGGTAGTGTGAGCAATAAAATTGAAGGAACTATGAACAAGAAGATTACTAGTGATCCTTATGTATCGATTTTAATATCCAATGCTGTACTTGGGAGGACTTATGTCATCAGCAACTCTGAAAACCCTGTTTGGTTGCAACATTTCTATGTTCCTGTTGCACATCATGCTGCAGAAGTACACTTTCTTGTTAAAGACAGTGATATTGTGGGTTCACAGCTCATTGGCATTGTGGCAATTCCAGTTGAGAAAATATACTCAGGAGAAAAGGTTGAAGGAATCTTCCCAATCCTGAATAGTAATGGGAAGCAATGTAAGCAAGGTGCTGTTCTGAGCCTATCCATTCAGTACATACCTATGGAGAAAGTGAGCATTTATCACAAAGGAGTTGGAGCAGGGCCTGAATACATAGGGGTTCCTGGGACATACTTTCCTCTGAGAAAAGGTGGAACCGTTACTCTGTATCAAGATGCTCATGTTCCAGATGGAAGCCTCCCTAATGTGTTGCTTGACAGTGGGATGTACTATGTGCATGGAAAGTGTTGGCAAGATATGTTTGAGGCCATAGGTCAAGCTAGGCGTTTGATTTATATTACAGGGTGGTCAGTGTGGCACAAAGCAAGGTTGGTTCGAGATGCTGCTGGTTATTCTTCAGATTATTCCTTGGGTGAGCTTCTAAGGTCAAAGTCACAGGAAGGAGTAAGAGTGCTTCTGCTTATCTGGGATGATCCTACATCAAGAAGCATTTTAGGTTATAAAACAGATGGTGTCATGGCAACTCATGATGAGGAAACTCGACGATTTTTCAAGCACTCTTCAGTGCAAGTGCTTCTTTGTCCCCGCAGTGGTAAACGTCATAGCTGGATCAAGCAAAAGGAAGTTGGAACGATATATACACATCATCAGAAAACTGTTATTGTGGATGCCGATGCTGGAAGTAATAGAAGAAAAATTATAGCATTTGTTGGTGGACTTGATCTGTGTGACGGGCGATATGATACTCCTCACCATCCTCTTTTTAGAACATTGAATACGGCACATAAGGATGACTACCACAACCCTACTTTCACGGGTAATGTTGGTGGTTGTCCACGGGAGCCATGGCATGATTTGCATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCACGGCATTAAAAAGTTGAAAATTTCATACGATGATGCTTTGCTAAGGTTGGAAAGAATTCCAGATTTTATTGGCATCAATGATGCTCCAAGTGTTGGTGAAGATGATCCTGATGTTTGGCATGTTCAGATATTTCGTTCAATTGATTCAAATTCGGTTAAGGGGTTTCCGAAGGATCCAAAAGATGCAACAAGCAAGAACCTGGTATGCGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTTAAGGCTATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTTATCGGCTCTTCATACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAACTTAATCCCAATGGAAATTGCTCTAAAGATTACTGAAAAGATAAAAGCAAATGAAAGATTTGCAGTGTATGTTGTTATTCCCATGTGGCCAGAAGGAGTTCCAACAGGGGCTGCCACGCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACCGTTTACAAGGCTTTGGTTGAAGCAGGGCTTGAAGCAGCATTTTCTCCACAAGATTATTTGAACTTTTTCTGTCTTGGTAATCGAGAGGTCATAAGTACGCATGATAATGTTAGTGCGACAGGAGCTCCTCCCCCAGCAAATAGTCCTCAAGTGGCTAGCCGAAATAGCCAACGTTTCATGATTTATGTTCATTCAAAGGGCATGATAGTTGATGATGAATATGTGATATTGGGGTCTGCAAACATTAACCAGCGCTCCATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGCGCCTATCAACCTTATCATACATGGGCAAAATCACAATCTACTTATCCACACGGTCAAATCCATGGATATAGGATGTCACTTTGGGCAGAACACACAGGAACAATTGAGGACTGCTTCTTGCAACCTGAGAGTCTTGAATGTGTAAGCAGGGTTAGAGCAATGGGAGAAATGAACTGGAAACAATTTGCAGCAAATGAAATAACAGAGATGAAAGGGCATCTGCTGAAATACCCTGTAGAAGTTGATAGAAAGGGCAAAGTTAGACCACTTCCAGACCAAGAAGAGTTCCCTGATGTGGGAGGAAAAATAGTTGGATCTTTTCTTGCCATGAAGGAGAATCTAACCATTTGA 3297 0.4268 MDNYGSSSPYGYPSPYAYPSDPRQPYPPPPGSAPDPYAHLPYPPYPYLSSHSLNYSHHPPPRPMHSGHFEYSYPPSMDFPHPPPPAYAPPPSYPYPYHVPPPNHGSPRPPLLHHASFQHGSPPYYYPPKESYSPPPDIHSHTNSFSGPYWQENTSTAAEGKVSQTSHSSKPSQGSSYPPLDDLMNNVRLSDDGKPTAPASPPAPAGQPFMHSISVPKLQQKREEFYGYSNNSFSGWGSSYPTRMDSLRLSDFSGSFNESVYGQNLQIVPAQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGSVSNKIEGTMNKKITSDPYVSILISNAVLGRTYVISNSENPVWLQHFYVPVAHHAAEVHFLVKDSDIVGSQLIGIVAIPVEKIYSGEKVEGIFPILNSNGKQCKQGAVLSLSIQYIPMEKVSIYHKGVGAGPEYIGVPGTYFPLRKGGTVTLYQDAHVPDGSLPNVLLDSGMYYVHGKCWQDMFEAIGQARRLIYITGWSVWHKARLVRDAAGYSSDYSLGELLRSKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSGKRHSWIKQKEVGTIYTHHQKTVIVDADAGSNRRKIIAFVGGLDLCDGRYDTPHHPLFRTLNTAHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDFIGINDAPSVGEDDPDVWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKITEKIKANERFAVYVVIPMWPEGVPTGAATQRILFWQNKTMQMMYETVYKALVEAGLEAAFSPQDYLNFFCLGNREVISTHDNVSATGAPPPANSPQVASRNSQRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDSEIAMGAYQPYHTWAKSQSTYPHGQIHGYRMSLWAEHTGTIEDCFLQPESLECVSRVRAMGEMNWKQFAANEITEMKGHLLKYPVEVDRKGKVRPLPDQEEFPDVGGKIVGSFLAMKENLTI* 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0137 1098 MobiDBLite consensus disorder prediction 90 208 - -
Pvu8g0137 1098 SMART C2_3c 284 406 IPR000008 -
Pvu8g0137 1098 Gene3D C2 domain 278 422 IPR035892 -
Pvu8g0137 1098 MobiDBLite consensus disorder prediction 1 37 - -
Pvu8g0137 1098 Pfam Phospholipase D Active site motif 609 643 IPR001736 GO:0003824
Pvu8g0137 1098 Pfam Phospholipase D Active site motif 944 970 IPR001736 GO:0003824
Pvu8g0137 1098 ProSiteProfiles C2 domain profile. 268 407 IPR000008 -
Pvu8g0137 1098 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 608 643 IPR001736 GO:0003824
Pvu8g0137 1098 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 281 431 IPR035892 -
Pvu8g0137 1098 SUPERFAMILY Phospholipase D/nuclease 774 1030 - -
Pvu8g0137 1098 Gene3D Endonuclease Chain A 757 998 - -
Pvu8g0137 1098 MobiDBLite consensus disorder prediction 90 108 - -
Pvu8g0137 1098 SMART pld_4 608 643 IPR001736 GO:0003824
Pvu8g0137 1098 SMART pld_4 943 970 IPR001736 GO:0003824
Pvu8g0137 1098 Pfam Phospholipase D C terminal 1018 1088 IPR024632 -
Pvu8g0137 1098 MobiDBLite consensus disorder prediction 136 180 - -
Pvu8g0137 1098 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 943 970 IPR001736 GO:0003824
Pvu8g0137 1098 PANTHER PHOSPHOLIPASE D ALPHA 1 184 1098 - -
Pvu8g0137 1098 PANTHER PHOSPHOLIPASE D 184 1098 IPR015679 -
Pvu8g0137 1098 Pfam C2 domain 283 409 IPR000008 -
Pvu8g0137 1098 MobiDBLite consensus disorder prediction 15 37 - -
Pvu8g0137 1098 CDD C2_plant_PLD 278 430 - -
Pvu8g0137 1098 Gene3D Endonuclease Chain A 486 722 - -
Pvu8g0137 1098 SUPERFAMILY Phospholipase D/nuclease 487 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0137 Pvu-Chr8 1174703 1183001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0137 65 1098 Phospholipase D Gene Family (Wang group) AT2G42010 68.500 0.0 1464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0137 K01115 - gmx:100791059 1906.34