Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0115 ATGTCCAAGGACAATAAGGGATTGGCCATAGGAATAGACCTTGGCACAACATACTCGTGTGTTGCAGTATGGCAGCAACAACATAATAGAGTGGAGATCATCCATAATGATCAAGGTAACAAGACCACTTCTTCCTATGCCGCAAAAAATCAGGCTGCTATGAATCCAGAGAACACCATCTTCGATGCTAAGAGGCTAATAGGTAGGAAGTATAGTGACCAAATTGTTCAAAAAGATAAAATGTTGTGGCCGTTTAAGATTGTTGCCGGTGTCAATGACAAGCCCATGATTTCTGTCAAGTACAAGGGTCAGGAGAAGAACCTTTGTGCGGAAGAAGTATCATCCATGGTCCTCTCAAAGATGCGGGACACTGCAGAGGCATACTTGCAAAAACCTGTGAAGAAAGCAGTGATTACTGTACCTGCCTATTTCAATGATTCTCAGCGCAAAGCCACCATGGATGCTGGTGCTATTATCGGCCTCAATGTTATTGGTATGATCAATGAACCCACTGCTGCAGCAATTGCATATGGTCTTGATAACAGAAATGATTGGGTTGGAGGGCGAAATATTTTTGTTTTTGACTTTGGTGGTGGTACATTTGATGTGTCTCTTCTCACTGTTAAGGGGAAGGTATTCAAAGTCAAGGCCACTGCAGGGAACACTCATCTTGGGGGAGAGGACATTGATAACAGAATGGTGAACTACTTTGTAAGGGAGATGAAAAGAAAAAATAAAGTGGACATAAGTGGGAATCCACGAGCCCTAAGGAGGTTGAAAAGTGCTTGCGAGAAAGCAAAAAGGACACTCTCATATAATGTTACTACAAACATTGACCTGGATAGTTTATTTCAAGGCATTGATTTGTGTTCTTCAATATCTCGTGCCAAATTTGAAGAAATCAATATGGAGCTTTTTGAAGAGTGTATGGAGACAGTAGATAGGTGTCTTAGGGATGCTAAGATGGACAAAAACAGTGTGCATGATGTTGTCCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGCAGCTACTGCAAGACTTTTTCAATGGGAAAGATCTTTGCACGAGCTTAAACCCTGATGAGGCTGTTGCTTACGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTGAAGGCATTAAGAATGTTCCTGACCTGGTTGTGTTGGATATTACACCACTGTCACTTGGTAGGAGTATTGTAGGGGATATCATGAGCGTTGTCATTCCTAGGAATACTACTATTCCTGTAAAGAGATCGAAAGAATATCACACAATTGAAGACAATCAATCCTCAACCCTAATTGAGGTCTATGAGGGCGAGAGAACTAGAGCCACGGATAATAATTTGTTGGGTTCTTTTGTTCTTTCTGGATTTCCTCCAGCTCCTCGTGGCTATCCTAGCTGGGTAACTTTTGCACTAAATGAAAATGGCATTCTATCCATTTCTGCTGAGGATAAAGCTGGAAATAGGAATGAAATTACAATAACCAATGAGAAAGGAAGATTAACAGCTGCAGAAATAAGTATAAAGATTCAAGAAGCAGAAAATTACAAATCTGAAGATGAAAAGTTTCTTAAGAAAGCCAATGCAATGAATGATTTAGATTATCATGTTTACAAGATCAGAAAGGCATTAAAGAAAGAGGATATCGATTCAAAGTTGAGCTCAAAAGAAAAGGAAAATATCAGTTCTACTATGTCTAGAGCCATGGATATGCTTGATGATCGAAATCAAATCGAAGATTTAGTTGCTGTCGAAGACTGTCTGAAAGAGCTTCAA 1782 0.4035 MSKDNKGLAIGIDLGTTYSCVAVWQQQHNRVEIIHNDQGNKTTSSYAAKNQAAMNPENTIFDAKRLIGRKYSDQIVQKDKMLWPFKIVAGVNDKPMISVKYKGQEKNLCAEEVSSMVLSKMRDTAEAYLQKPVKKAVITVPAYFNDSQRKATMDAGAIIGLNVIGMINEPTAAAIAYGLDNRNDWVGGRNIFVFDFGGGTFDVSLLTVKGKVFKVKATAGNTHLGGEDIDNRMVNYFVREMKRKNKVDISGNPRALRRLKSACEKAKRTLSYNVTTNIDLDSLFQGIDLCSSISRAKFEEINMELFEECMETVDRCLRDAKMDKNSVHDVVLVGGSSRIPKVQQLLQDFFNGKDLCTSLNPDEAVAYGAAVQAALLSEGIKNVPDLVVLDITPLSLGRSIVGDIMSVVIPRNTTIPVKRSKEYHTIEDNQSSTLIEVYEGERTRATDNNLLGSFVLSGFPPAPRGYPSWVTFALNENGILSISAEDKAGNRNEITITNEKGRLTAAEISIKIQEAENYKSEDEKFLKKANAMNDLDYHVYKIRKALKKEDIDSKLSSKEKENISSTMSRAMDMLDDRNQIEDLVAVEDCLKELQ 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0115 594 PANTHER HEAT SHOCK PROTEIN 70KDA 4 594 IPR013126 GO:0005524|GO:0140662
Pvu8g0115 594 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 382 536 IPR029047 -
Pvu8g0115 594 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 381 532 IPR029047 -
Pvu8g0115 594 ProSitePatterns Heat shock hsp70 proteins family signature 2. 193 206 IPR018181 -
Pvu8g0115 594 SUPERFAMILY Actin-like ATPase domain 188 377 IPR043129 -
Pvu8g0115 594 ProSitePatterns Heat shock hsp70 proteins family signature 3. 330 344 IPR018181 -
Pvu8g0115 594 Pfam Hsp70 protein 9 584 IPR013126 GO:0005524|GO:0140662
Pvu8g0115 594 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 531 594 IPR029048 -
Pvu8g0115 594 Gene3D Actin; Chain A, domain 4 225 308 - -
Pvu8g0115 594 Gene3D - 10 374 - -
Pvu8g0115 594 Gene3D - 61 116 - -
Pvu8g0115 594 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pvu8g0115 594 Gene3D - 533 594 IPR029048 -
Pvu8g0115 594 SUPERFAMILY Actin-like ATPase domain 8 180 IPR043129 -
Pvu8g0115 594 Gene3D - 182 356 - -
Pvu8g0115 594 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 594 - -
Pvu8g0115 594 PRINTS 70kDa heat shock protein signature 8 21 - -
Pvu8g0115 594 PRINTS 70kDa heat shock protein signature 48 56 - -
Pvu8g0115 594 PRINTS 70kDa heat shock protein signature 136 156 - -
Pvu8g0115 594 PRINTS 70kDa heat shock protein signature 199 209 - -
Pvu8g0115 594 PRINTS 70kDa heat shock protein signature 327 343 - -
Pvu8g0115 594 PRINTS 70kDa heat shock protein signature 359 379 - -
Pvu8g0115 594 PRINTS 70kDa heat shock protein signature 385 404 - -
Pvu8g0115 594 PRINTS 70kDa heat shock protein signature 465 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0115 Pvu-Chr8 1050999 1052908 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0115 1 594 Calmodulin-binding Proteins AT3G12580 63.383 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0115 K03283 - gmx:102667578 902.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0115 8 1050999 1052908 Pvu8g0115 8 1050999 1052908 ECH