Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0099 ATGGCCTTACAGAACATTGGTGCTGGTAACAGTGATGATGCCTTCTACAGGTACAAGATGCCTCGAATGGTCACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACAAATGTTGTCAATATGGTTGATATTGCGAAAGCCTTGGCTAGGCCAGCTTCCTACACAACAAAGTATTTCGGATGTGAGCTTGGAGCCCAATCAAAGTTCGACGAGAAAACCGGGACTTCCCATGTTAATGGTGCACATGAAACTGCAAAACTTGCTGGCCTTCTTGAGATCTTCATCAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAAATCTTAATTACTAAGAACCAGATGATCCAGCTGAAATGTGCTGCTTGTGGGTTTGTGTCTGATGTTGATATGAGAGACAAGCTAACTACTTTCATCGTTAAGAACCCACCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAAGAGAGACTGAAGGAAGGTGAAATGGCTGATGAGGAACAGAAAAAAGTGAAGAAAGAGGTTATTAAGAAGAAAGGAACTTCATCTTCTAAGGATGGCGCTCCAAAATCTACCTCTTCAAGGAAAAAGGCAAATGGCTCTGATGAAGACAGGGCATCTCCTCCTCCTCGCAGTCTTGCTGATGAGAAGGATGAGGCTCATGACAATGAAGATGTGGATGACGACAACATACAATGGCAAACCGATACATCACTGCAGGCTGCTCGTCAACGAATCCAGGAACAGTTGAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAGATGAACCAGAGAAGAAGGAGAAAGCCAGAACTAAGGTAAGTGATAATTCTGAGAATGGTAACTCTTTGACCTACAGGACTCTGGTTGCAGAAGTCAAAGCAAATTTGAACAAAGGTGTTAAGGCAAAAGAGTTGGTGTCCCATCTAGCAGCACATCCTGCATCTGCTCAGGAGAAAATGAGTGCTCTGTATGAAGCCCTGTTTGGAGGCATCGAGAAAGGGTTTGCCAAAGAAGCAATTAAGAAGAAGAACTACCTTGCTGCTGCAGTTGCCGAGGAAGAGGGGTTGCAGTTGTTGCTGCTGTGTGCAATTGAGGAATTTTCTTGCAAGTCTACTTCCAATGCGTTGAAGGAAGTTGCCCTTGTTCTGAAGGCACTCTACGACGCTGATGTGTTGGAGGAAGAGCACATAGTGCAGTGGTATCAAAAGGGGCTGAAGGGCGATAACAAGAACTCTCAGATTTGGAAGAATGCTCAGCCCTTCATTGAATGGCTTCTGAATGCAGAATCAGAATCGGATGAAGAGTGA 1341 0.4452 MALQNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEMADEEQKKVKKEVIKKKGTSSSKDGAPKSTSSRKKANGSDEDRASPPPRSLADEKDEAHDNEDVDDDNIQWQTDTSLQAARQRIQEQLSAVTADMVMLSTDEPEKKEKARTKVSDNSENGNSLTYRTLVAEVKANLNKGVKAKELVSHLAAHPASAQEKMSALYEALFGGIEKGFAKEAIKKKNYLAAAVAEEEGLQLLLLCAIEEFSCKSTSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDNKNSQIWKNAQPFIEWLLNAESESDEE* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0099 446 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Pvu8g0099 446 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Pvu8g0099 446 MobiDBLite consensus disorder prediction 148 228 - -
Pvu8g0099 446 SMART 542_3 354 442 IPR003307 GO:0005515
Pvu8g0099 446 Gene3D - 3 104 - -
Pvu8g0099 446 MobiDBLite consensus disorder prediction 147 239 - -
Pvu8g0099 446 Gene3D - 286 446 - -
Pvu8g0099 446 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 446 IPR045196 GO:0003743|GO:0006413
Pvu8g0099 446 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 446 - -
Pvu8g0099 446 Gene3D - 105 145 - -
Pvu8g0099 446 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Pvu8g0099 446 Pfam eIF4-gamma/eIF5/eIF2-epsilon 368 446 IPR003307 GO:0005515
Pvu8g0099 446 SUPERFAMILY ARM repeat 296 440 IPR016024 -
Pvu8g0099 446 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Pvu8g0099 446 CDD W2_eIF5 299 444 - -
Pvu8g0099 446 ProSiteProfiles W2 domain profile. 286 446 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0099 Pvu-Chr8 934550 937700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0099 1 439 Eukaryotic Initiation Factors Gene Family AT1G36730 63.697 1.85e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0099 K03262 - gmx:100777906 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0099 8 934550 937700 Pvu8g0099 8 934550 937700 ECH