Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0098 ATGGCTTTACAGAACATTGGTGCTGGAAACAGCGATGATGCCTTCTACAGGTACAAGATGCCTCGAATGGTCACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACAAATGTTGTCAATATGGTTGATATTGCGAAAGCCTTGGCTAGGCCAGCTTCCTACACAACAAAGTATTTCGGATGTGAGCTTGGAGCCCAATCAAAGTTTGATGAGAAAACCGGGACTTCCCATGTTAATGGTGCACATGAAACTGCAAAACTTGCTGGCCTTCTTGAGATCTTCATCAAGAAATATGTCCAGTGTTATGGTTGTGGGAATCCTGAAACTGAAATCTTAATTACTAAGAACCAGATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTTGATATGAGGGACAAGCTGACTACTTTCATCGTTAAGAATCCTCCAGAAGTAAAGAAAGGATCTAAGGACAAGAAGGCCATGCGGAGAGCTGAGAAGGAGAGACTCAAGGAAGGGGAAGCAGCTGATGAGGAACTGAAGAAAGTGAAGAAAGAGGTTAAGAAGAAAGGTTCTTCATCTGCAAAGGATGGCACTGCAAAATCCACCATTTCAAAGAAGAAAGGAAGTGGCTCTGATGAAGACCGCAGATCGCCTACTCACAAACAAATTGAAGAGAAAGAGGAGGCTAAGGATGAAGATGATGATGATGATGATGGTGTGCAATGGCTGACAGATACGTCACTTGATGCTTCTCGTCAACGTATCAAAGAACAGTTAAGTGCCGTGACAGCTGATATGGTTATGCTTACTACTGATGAACCAGAGAAGAAGAAAAAAGCAGCAAGTAATCAAAATGGTGGTTCTCAGAATGGTAATTCAAAGAACTACGGGACTGTGGTCGCTGAAGTGAAAGCAAATTTGAAGAAAGGTTTTGGAGCAAGTGAATTGCTTTCTCATCTTGCAGCACTTCCTGTACCTGCTCAAGAAAAGATGAGTGCTCTGGTTGAAGCTCTATTCGAGGGAACAGAGAAAGGTTTTGGTAGAGAAACTCTTAAGAAGAAGAATTACTTCGCTGCAGCTGTTGCCGAGGAGGGATCCCAGATTTTATTGCTTCATGCTATTGAGGAATTCTGTTGCAAGCCTAATTCCAATGCTTTGAAAGAGGTTGCCCTGGTTCTGAAGACACTGTACGATGCTGATGTGTTGGAGGAAGAGGCCATAGTTCTGTGGTATCAAAAGGGATTGAAAGGCGATAACAAGAACTCCAAGATTTGGAAGAATGCTCAACCTTTCATTGACTGGCTTCAGAACGCAGAATCAGAATCGGATGAAGAATAA 1332 0.4279 MALQNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKVKKEVKKKGSSSAKDGTAKSTISKKKGSGSDEDRRSPTHKQIEEKEEAKDEDDDDDDGVQWLTDTSLDASRQRIKEQLSAVTADMVMLTTDEPEKKKKAASNQNGGSQNGNSKNYGTVVAEVKANLKKGFGASELLSHLAALPVPAQEKMSALVEALFEGTEKGFGRETLKKKNYFAAAVAEEGSQILLLHAIEEFCCKPNSNALKEVALVLKTLYDADVLEEEAIVLWYQKGLKGDNKNSKIWKNAQPFIDWLQNAESESDEE* 444
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0098 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 443 - -
Pvu8g0098 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 443 IPR045196 GO:0003743|GO:0006413
Pvu8g0098 443 MobiDBLite consensus disorder prediction 226 240 - -
Pvu8g0098 443 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Pvu8g0098 443 MobiDBLite consensus disorder prediction 271 293 - -
Pvu8g0098 443 Gene3D - 3 104 - -
Pvu8g0098 443 SMART 542_3 352 439 IPR003307 GO:0005515
Pvu8g0098 443 MobiDBLite consensus disorder prediction 147 244 - -
Pvu8g0098 443 MobiDBLite consensus disorder prediction 279 293 - -
Pvu8g0098 443 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Pvu8g0098 443 SUPERFAMILY ARM repeat 290 437 IPR016024 -
Pvu8g0098 443 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Pvu8g0098 443 Pfam eIF4-gamma/eIF5/eIF2-epsilon 365 443 IPR003307 GO:0005515
Pvu8g0098 443 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Pvu8g0098 443 MobiDBLite consensus disorder prediction 148 225 - -
Pvu8g0098 443 Gene3D - 105 145 - -
Pvu8g0098 443 ProSiteProfiles W2 domain profile. 284 443 IPR003307 GO:0005515
Pvu8g0098 443 CDD W2_eIF5 291 441 - -
Pvu8g0098 443 Gene3D - 286 443 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu8g0098 Pvu-Chr8 930691 933331 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0098 1 436 Eukaryotic Initiation Factors Gene Family AT1G77840 61.991 2.49e-173 491
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0098 K03262 - gmx:100777906 732.635