Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0091 ATGGATTTCCGCAGTAATTCAATTTCATCAAATCTGGTACCAAATTCTATGTCAGTGCCCTCTTGTCCTATACTTCATTATCATCAAGAAAAAAATAGAGAGAGGAGGAACACTTTCAATCTACCATTGGATTTCAAAGGTAATTCATCTTCAACAAATGTGTTATCAAACTCCATGTCAATACCCTCATATCCAATGCCTCAGTATTATCCAGAAAGCATACAGGAGGGGAAACTCCGATCCTTCTGGGAGAAGCAGTTGTTGGATATTCAAGCTGCTGAAGCATTTAAGAGCCAGCACAAGTTGCCGCTAGCTCGAATCAGAAGGATCATGAAAACAGACGCAGATGTGCAGATGGTGAGTGCTGAAACTCCCATGCTGATGTCAAAAGCATGTGAGATTTTCATCCAGGAGCTGACTTTTCGTGCATGGATGCGTGCTGAAGAGAGCAACAAGAGTACTGTGCAGCCATGTGATGTTGCCAAGGTTATTATGCAAAATGATGCCTTGCATTTCCTCACTGATATTGTCCCAGATAACCTCCAAAATTTCTGTGCTTATGGTGCTGCTGAGGAAGAGCATGCTACTGGAAACTTTCCAGAAGGAAGACATTCAAGCCAAACTGCCCTGCCTGACACAGCTGGTTTTAGAAATCCTATGAATATGATGAACATGAGCAGAGGCTTGGGGGCAGGAAACCAAGTGATTCCTCAACCCAACAACAACAACATGATGCAGCCTCCCTTTGTTATGCCTTCAGATCAATTGCCTTACAATTTTCATCCCAAGTGA 792 0.428 MDFRSNSISSNLVPNSMSVPSCPILHYHQEKNRERRNTFNLPLDFKGNSSSTNVLSNSMSIPSYPMPQYYPESIQEGKLRSFWEKQLLDIQAAEAFKSQHKLPLARIRRIMKTDADVQMVSAETPMLMSKACEIFIQELTFRAWMRAEESNKSTVQPCDVAKVIMQNDALHFLTDIVPDNLQNFCAYGAAEEEHATGNFPEGRHSSQTALPDTAGFRNPMNMMNMSRGLGAGNQVIPQPNNNNMMQPPFVMPSDQLPYNFHPK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0091 263 Gene3D Histone, subunit A 68 179 IPR009072 GO:0046982
Pvu8g0091 263 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 59 243 - -
Pvu8g0091 263 SUPERFAMILY Histone-fold 77 173 IPR009072 GO:0046982
Pvu8g0091 263 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 59 243 IPR027170 GO:0003700|GO:0006355|GO:0016602
Pvu8g0091 263 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 101 163 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0091 Pvu-Chr8 857923 860981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0091 81 224 CCAAT-HAP5 Transcription Factor Family AT1G54830 41.379 1.12e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pvu8g0091 CBFD_NFYB_HMF 6.4e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0091 - K08066 gsj:114370134 179.489