Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0075 ATGGCTGAAGTTGAATACCTTGCAAAATCCACTACCCTAAAGCTCTTTGGCATCAACATTAACAAGTCCCCAGAAAATCAAACGCATCACCAACCAGCTTCCGATTCTGAGTCTTTCATGGCAAGAAAATACGAGTGTCAGTACTGCTTCAGGGAATTCGCAAATTCACAAGCACTTGGAGGGCACCAAAACGCGCACAAGAAAGAGAGACAGCTCTTGAAACGCGCTCAAATGCAAGCCGCTCGCGGCTTTGTCGCTTCGCACGTTCACAACACCATCATGTCAACCTTCTCACCACAATCTCAGCCACCTTTACCGTGGCTATGCGCACCACATGCATGGTCAAGCGACTCAGGAGTCGCTTTTGTGACTCCTGGAAGACGAGTCTATGCCACGGCCGGTGCCTCCGTCACCGATGGCCGCGGCCACCGCAATACTCCGGCAGAGATCGGTGGCTTCAACGGCGGCAATGGCAGAGGGAACGGTGGTGGTGAACGAGGGTTCGGTTTGGATTTGCATCTTAGCCTTGTCATCGCAGGAATAATCCCTCATTTCTCGAAGATTGAATCACTATAG 576 0.5122 MAEVEYLAKSTTLKLFGININKSPENQTHHQPASDSESFMARKYECQYCFREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASHVHNTIMSTFSPQSQPPLPWLCAPHAWSSDSGVAFVTPGRRVYATAGASVTDGRGHRNTPAEIGGFNGGNGRGNGGGERGFGLDLHLSLVIAGIIPHFSKIESL* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0075 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 44 71 IPR013087 -
Pvu8g0075 191 PANTHER ZINC FINGER PROTEIN 6-LIKE 8 176 - -
Pvu8g0075 191 SUPERFAMILY beta-beta-alpha zinc fingers 42 71 IPR036236 -
Pvu8g0075 191 PANTHER ZINC FINGER PROTEIN 5 8 176 IPR044299 GO:0010090
Pvu8g0075 191 ProSitePatterns Zinc finger C2H2 type domain signature. 46 66 IPR013087 -
Pvu8g0075 191 MobiDBLite consensus disorder prediction 138 158 - -
Pvu8g0075 191 Gene3D Classic Zinc Finger 21 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0075 Pvu-Chr8 757716 759053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0075 8 176 C2H2 Transcription Factor Family AT1G67030 42.784 1.38e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu8g0075 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0075 - - gmx:100527555 236.498