Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0072 ATGAATGATTCCACGGTGAAGAATTTGGCTATCACGGAGAGGAAGGTGCAGCAGAAGCCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATCGATTGGAAGAGGAAACTCTCCAAGAAGAAGCTCTTCTCCAAGAAGCTTCTTCCTCCTGCTCGTGCGAAAAAGTTCAAGGGGGATGAAAAGATGTCAAATTCCAAGATTCATTTGATTGCTAACGAGAACAGTGGAGGTTTCCCAAGTGCTAATAAGAAAGGTGGAAATCATGGCTTCGACGTAGACCAGAAGAGTGAAATGCGAGTTCCGAGTCTAGTAGCCAGATTGATGGGTCTAGAATCTATTCCTACTGCTCAGCGAGATAAATCCAAGAAAGCCTTGTGTGCTGATGGGAAGAATGAGTCTTTGGGTGGTGATCATTGTGAGTTGGAAAGGCAAGGCATGGATTTGGAAGTGGGAGTTGTGAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACCGGGTCCTATGAGAGAAGGGCAGTGACTAGATTTGGAGCTGAGGCTTTCCAAATCAAGAGTGTATTATCGCGAGGAAGAAAGTATCATCACCATCATCATCATCCGAAGTTTGCTTCTTCTTTGAAGAGCCCGAGAATTCCTTCGGGAAAGAGTGCTTCTCGAAGCTCTAGGTTGATAGGAGCAGCTACTAAAATTTTGGAACCTGGACTGCAAAGCAGAAGTAGGGCCAAAGTTTCTCTAGCATACCCTGCTTCCATGTATCCTTCCAAGACTGGCATTGTGACAAATGATGTGCAAAATCAGTCTTGTTATGAAGCTGGCTCATGCAAGCAATTGATGGAGCAGAGCTCTTGTAAAAACTGTGGTAATTTGCTAGATGTTGTTGACTGCAAGCTTGAGGTTGGAGGACAGCCATTGGATCATCCACCCGTTGTTTCAGATGTGATCACAGCTACTTCTATGGTATCATCAGAGAAGAAGGGAAAGTCATTCAGTTCCCTTGGACATGAGAGAGATGTAGTTCTTCTCAGAAGTCAGGAAAAGCTCATATCTCTTGATTCTGAAGAGAAGGGGAAAAATAATGCACATATATCATGGAGTGAACCCACTGTTAGAAGAATGTCAATGCCCCGTGATTGTCTACCTAAATGGAATTCATCTTGCCAATCATCAAGGACCCTTGAGGATGATCCAACTTCTTTTCCCTCAAAACACAAAACTCAATCACAAGAGCAGATGATAAGCAGTGAAAGATATTCATCTGGATCTACAATGAGCGATATGCAAGTAAAAAGGGTATCATCATCTACGAGTACAATGAATGGGGCTAAAGACTTTGTATCTATGAATAGAAGTCTTAGTGGTCGAACAAGAACAAGATCACCTACCAAAGCTGATAGTTCTAAATTTGACTTAGAGAGAAAACCGTATAATCGACAGCATAATTCTTTGTCACACGTAAGAACATTAGAGAGAAAAAGAAGGATCCCAAATGCCACTCAACTAGAAGGCACAGGTTCTGTTTATTCAGTTGGTGCAAAACAGAGAAATCTCCACTCTAATGGATTGTGTGGCAAAAGGAGGGACTCCAATGCTTCCTCCTTGAACAATTCTATCGGAAAAAATAAGCAAGTTGCTCAAGGAGAAAGAGTTATTAAGGTTAATGACAACAAGATCAATGGTGTAGTGTCATTTACATTTAATTCCCCCCTGAAGCAAAAGTTAGGAATAACTGTTGAGAGGGAAGAGACAAGCAGTGACAATGAGAGTATTAAAAGGCCCAAACCCTTGAGAGTTGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAGGAATTAACCTCTCAAAGAGACGAAGAATTAGCTACAGGTTTTCCTCCTAAAAAATCAAGTGCCATGATTCTTCAAGAACTCATATCTGCATTAAGTTCAGAGCATTTGATCTGTCATGATGGCCATCATGTGTTTAATGATAATGTCGGTTTGCATTATGGGGAAAAACAAGAAAGGTTATTAGGAACCTCTTGCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATGGTTTTCACCCTGACTCAATGAATCACTCTTGTTATGGTCAACTAGAACATGACACTGAACTTTCAGATTCTGCAACATCCTTTACCAAAGGGAGGATAGTTGAGATACTGAGTGATCTTGTCAGCCAAATTCCCAAGGCATTGGAAAGTTTGCACACTTTTGGGTCAGAATTAACAATAAGCAAGCTGAACCATATGAAGGATATTCTCTTGCATGCTGAATTGGTGCTTGGAATTACAACTGATCGCAGACAGGATGAAGGGCCACAACTTATAATTCATCGGTTTCTCGTTGATGATCTCGAGAGTATGACGAGTGGTGCTACGTGGAACGATGTGGGGTGTGAGGATTCAAAACAGAGAAAGGAAGTAAAGGGTTTTCTCCTTGATTGTGTTGTGGAATATCTAGAATCAAACTGCAGTCTTTATTTTAATTCTGGATTCAGGACATGGACAAAGTTACCTTTATGCATGAGAGCTGAGATGTTGGCTAAAGAGGTGAAGAGGGAGATCAATAAGTGGTTATCTATGGTTGGGATGGTACCTGATGAAATAATAGAATGGGAAATGAGTCACTCCTTGGGGAAATGGTTAGACTTTGATATTGAAGCATTTGAGTCTGGTGTTGATATAGATGGGGATATACTTCAAATTTTGGTCGATGAAGTTGTTGAAGATCTTGTGGGCTGCACTCAAAATTCCATTAGCTGA 2811 0.4127 MNDSTVKNLAITERKVQQKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPARAKKFKGDEKMSNSKIHLIANENSGGFPSANKKGGNHGFDVDQKSEMRVPSLVARLMGLESIPTAQRDKSKKALCADGKNESLGGDHCELERQGMDLEVGVVKHDSRPQKLQKTGSYERRAVTRFGAEAFQIKSVLSRGRKYHHHHHHPKFASSLKSPRIPSGKSASRSSRLIGAATKILEPGLQSRSRAKVSLAYPASMYPSKTGIVTNDVQNQSCYEAGSCKQLMEQSSCKNCGNLLDVVDCKLEVGGQPLDHPPVVSDVITATSMVSSEKKGKSFSSLGHERDVVLLRSQEKLISLDSEEKGKNNAHISWSEPTVRRMSMPRDCLPKWNSSCQSSRTLEDDPTSFPSKHKTQSQEQMISSERYSSGSTMSDMQVKRVSSSTSTMNGAKDFVSMNRSLSGRTRTRSPTKADSSKFDLERKPYNRQHNSLSHVRTLERKRRIPNATQLEGTGSVYSVGAKQRNLHSNGLCGKRRDSNASSLNNSIGKNKQVAQGERVIKVNDNKINGVVSFTFNSPLKQKLGITVEREETSSDNESIKRPKPLRVDALGAFLEQKLKELTSQRDEELATGFPPKKSSAMILQELISALSSEHLICHDGHHVFNDNVGLHYGEKQERLLGTSCNGNHLSPGSVLEASFSSSSLDESSGHGFHPDSMNHSCYGQLEHDTELSDSATSFTKGRIVEILSDLVSQIPKALESLHTFGSELTISKLNHMKDILLHAELVLGITTDRRQDEGPQLIIHRFLVDDLESMTSGATWNDVGCEDSKQRKEVKGFLLDCVVEYLESNCSLYFNSGFRTWTKLPLCMRAEMLAKEVKREINKWLSMVGMVPDEIIEWEMSHSLGKWLDFDIEAFESGVDIDGDILQILVDEVVEDLVGCTQNSIS* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0072 936 MobiDBLite consensus disorder prediction 189 204 - -
Pvu8g0072 936 MobiDBLite consensus disorder prediction 522 539 - -
Pvu8g0072 936 MobiDBLite consensus disorder prediction 519 539 - -
Pvu8g0072 936 Pfam Domain of unknown function (DUF4378) 764 922 IPR025486 -
Pvu8g0072 936 MobiDBLite consensus disorder prediction 381 459 - -
Pvu8g0072 936 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 9 929 - -
Pvu8g0072 936 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 9 929 - -
Pvu8g0072 936 MobiDBLite consensus disorder prediction 381 467 - -
Pvu8g0072 936 MobiDBLite consensus disorder prediction 189 219 - -
Pvu8g0072 936 Pfam DUF761-associated sequence motif 93 119 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0072 Pvu-Chr8 744257 749224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0072 1 927 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.432 2.20e-83 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0072 - - gmx:100813026 1485.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0072 8 744257 749224 Pvu8g0072 8 744257 749224 ECH