Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0056 ATGCGGATGAGCTGCAATGGGTGTCGAGTTCTGAGAAAAGGGTGCAGTGAGAATTGCAGCATCAGACCCTGTTTGCAGTGGATCAAAAGCCCAGAATCTCAAGCCAATGCTACTGTGTTTCTCGCCAAGTTCTATGGCCGTGCTGGTCTCATGAATCTCGTTAACGCAGGCCCCGAACATCTTCGTCCAGCGATCTTTCGTTCGTTGTTGTACGAGGCATGCGGTCGGATAGTGAACCCGATTTACGGTTCGGTTGGGTTGTTGTGGTCGGGGAGCTGGCAGCTGTGTCAAGCCGCAGTTGAGAACGTCTTGAGAGGCGCGCCGATCACGCCGATCACGTCTGAAGCGGCGGCGAGCGGGCGGGGCCCGCCGCTCAAGGCGTACGACATACGCCACGTGTCGAAAGATGAGAACTCCGCCGCGTCGAACGAAACTCAGCAGCAACGAGTCAAGACTCGGTCTCGCGTCAGGCGTCCACTCGCCAACGCCAACGCCAAGCCCAAATCCACCTCCAACGATAACAACGGTAACAAGGGAACCGAATTGGGTCTTTCTGAACCGGGTTTGATGACATGCGAGTGGACCGAAGAGGTGTTGAATCGATCTGGCAGTCACGATTCGTCGCTGAGCCACCAGTCTGAGGCGGCGAATGCGGTGGAGAGCGAGAGCATGGTGTCGGTGGAGACGGCGGAGACTTCGATCCTCTTCCGAGATGAACCGGAGTCGAACCGGAAGCTCGTGCGACGAACCGATGATGTTGGTTTGGAGCTTACGCTGGGGTTCGAACCGGTTTCACGTGCGCAGCACGTGGTTCCGGTGAAGAAGAGAAGGATCGAGTTGAAGGAATTTAGTGGTTCGGCTGAGAGTGAGTCGTGCAAGATGGAGCTGGGGCTTGAATGTTCGGCTTGA 909 0.5644 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVENVLRGAPITPITSEAAASGRGPPLKAYDIRHVSKDENSAASNETQQQRVKTRSRVRRPLANANAKPKSTSNDNNGNKGTELGLSEPGLMTCEWTEEVLNRSGSHDSSLSHQSEAANAVESESMVSVETAETSILFRDEPESNRKLVRRTDDVGLELTLGFEPVSRAQHVVPVKKRRIELKEFSGSAESESCKMELGLECSA* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0056 302 MobiDBLite consensus disorder prediction 164 181 - -
Pvu8g0056 302 MobiDBLite consensus disorder prediction 135 187 - -
Pvu8g0056 302 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Pvu8g0056 302 PIRSF AS2 1 302 IPR017414 -
Pvu8g0056 302 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Pvu8g0056 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 299 - -
Pvu8g0056 302 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0056 Pvu-Chr8 596737 598263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0056 1 298 AS2 family AT3G02550 56.333 9.86e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu8g0056 LOB 2.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0056 - - gmx:100807854 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0056 8 596737 598263 Pvu8g0056 8 596737 598263 ECH