Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0054 ATGGCTTCACTCGTTGGAAAGAGGAAGGTTCTGTTCATATTGGGTGCAACTGGCACTGGTAAGACCAAACTTTCCATCAACTTGGCCATGCAATTTCCCTCTGAAATCATCAACTCAGACAAAATCCAAGTCTACAAGGGTCTTGACATCATCACAAACAAGGCTTCTGAGTCTGAACGTTGTGGCATTCCTCATCACCTTTTTGGGATCATTGATGATCCTGATTCTGACTTTACCAGCGATGATTTCTGCAACCATGTTCTTGTTGCTCTTGATATCATCTTTCAAAATGGACACCTACCCATTATCGTGGGAGGCTCCAACACCTACCTCGGAGCCTTGCTTGAGGATCCCAACATTGCATTTTGCTCAAAATATGATTGTTGCTTCATCTGGGTTGATGTGTCTTTACCAGTCTTGTTCCCCTATTTGGACAAAAGGGTGGATGAAATGGTTGATGCAGGAGTTGTGGAAGAGATTCGAGAATATTTTGTGGCTGGAGCTGATTACAGTCGAGGGATCAGAAGAGCCATTGGGGTTCCTGAGCTCGGAGAGTATTTCCTTGTGGAGAAGGAAATGGACGACGAGGTTCAGAAGGAGAAGATGCTGCAACATGCGATTACGAAAACCAAAGAGAACACTCGTAGGTTGTCTGAGATGCAACTGTGGAAGATCCAAAAGATGAACTATGAACGGAAAATGACCAGAATTGATTCCACAAAAGTGTTTGAGGTTGTGTTAAAAGGAGAGGATTATAAGCATTTGTACCAAGAGATTGTGTTCAAACCAAGCATGGAGTTAGTACAAAAGTTTCTGGAGAAGACGACTGAAGTAAAAAAGATAATGCCTCAGAAGGCTGAACCAGCCACAATTTGTGCTTAA 882 0.4297 MASLVGKRKVLFILGATGTGKTKLSINLAMQFPSEIINSDKIQVYKGLDIITNKASESERCGIPHHLFGIIDDPDSDFTSDDFCNHVLVALDIIFQNGHLPIIVGGSNTYLGALLEDPNIAFCSKYDCCFIWVDVSLPVLFPYLDKRVDEMVDAGVVEEIREYFVAGADYSRGIRRAIGVPELGEYFLVEKEMDDEVQKEKMLQHAITKTKENTRRLSEMQLWKIQKMNYERKMTRIDSTKVFEVVLKGEDYKHLYQEIVFKPSMELVQKFLEKTTEVKKIMPQKAEPATICA* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0054 293 Pfam IPP transferase 43 117 - -
Pvu8g0054 293 Pfam IPP transferase 125 222 - -
Pvu8g0054 293 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 137 234 - -
Pvu8g0054 293 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 164 IPR027417 -
Pvu8g0054 293 Gene3D - 7 272 IPR027417 -
Pvu8g0054 293 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5 283 - -
Pvu8g0054 293 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 5 283 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0054 Pvu-Chr8 577940 579635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0054 107 277 C2H2 Transcription Factor Family AT2G27760 31.658 8.23e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0054 K10760 - gmx:121173984 451.055